KEGG   Alteromonas sp. B31-7: IUA53_18385
Entry
IUA53_18385       CDS       T11045                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
altb  Alteromonas sp. B31-7
Brite
KEGG Orthology (KO) [BR:altb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:altb03400]
    IUA53_18385
Enzymes [BR:altb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IUA53_18385
    5.6.2.6  RNA 3'-5' helicase
     IUA53_18385
DNA repair and recombination proteins [BR:altb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IUA53_18385
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 SNF2-rel_dom AAA_22 AAA_30 RRM_9
Other DBs
NCBI-ProteinID: QPL49760
LinkDB
Position
complement(4196735..4199188)
AA seq 817 aa
MTAKRPTIPDVFTHWFSSKAWRLRPYQKQMLVNKDKYKVTLLIAPTGAGKTLSGFLPSLV
ELTENQHKGLHTLYISPLKALTQDIHRNLLQPIEEMALPITAETRTGDTPSHKRQRQRRK
PPHILLTTPESLMLMLSYADADTLFGKLKRVIIDEAHSLNTNKRGDFLSLALARLNTLSP
DLQRIGLSATVAYPQTLGAWLAGSEKTAHVIKVKAGKKPKIKIVKSKARIPFGGFMARYA
IDDIYHAIAQARTALVFVNTRAQAEMLFQHLWEANTQALPIALYHGSLSKEQRRKTESLM
ATGELRAVVCTSALELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLDEPSDALLVPA
NRFEALECQAAITAIKKGQLDGESPQPGAMDIIPQFILNCLCSYPSTPEALYKEILNATP
YQGLDKDDFNKLWQFTLDGGSALNAYERYQRLTKNNDGTYSPANKRVIQRHRQNIGTIVE
AGRLKVKRIRRGNQGKVIGEVEEYFAQQLVPGDTFYFAGQVLKFEAIRDMQLHAKPANAK
EAKIPSYAGGQMPLSTFLADGVRDILASPSMWRNLPAQVKEWLGLQQAFSTLPSPGQLLV
EQFPFRQTHYTLFYTFDGRKANQTLGMLITRRMEKMGIKPLSFSVTDYGLSISAVNRISE
AQLTTLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHAAQKTMKQVTFSTDL
IYDTLREHDPDHILLTVARADAERELLDIKRLANLLIRYVGKTTLVNLEKVSPMAIPIVL
DVRSEQIKGAGAHAMLEQANLYAEAESMLDEVRALLS
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgacagccaagcggccaacaattcctgacgtttttacacattggttttcgagtaaggca
tggcgtttgcgaccttatcaaaagcaaatgttagtgaataaagataagtacaaggtgacg
ttactaatagcgcctacgggcgctgggaaaaccctatcggggtttttacctagcttagtc
gagctaactgaaaatcagcataagggcctacatacactttatatctcgccgctaaaagca
ctgactcaagatattcacagaaacttgctgcagcccattgaagaaatggcattgccgatt
actgccgaaacccgtaccggagataccccctctcataaacggcaaaggcagcgacgaaag
ccgccgcacattttgctcactaccccagagtctcttatgctgatgctaagttatgcggac
gcagacaccttatttggcaagcttaagcgggtgatcatcgatgaagcgcacagcttaaat
acgaacaaacggggcgactttttatcgctagccttagcgcggctaaatacgttgtcgccc
gaccttcaacggatagggttatcagccactgtggcttacccccaaacgttaggtgcttgg
ttggccggtagtgaaaaaacggctcacgttataaaagtgaaagcgggtaaaaagccaaag
ataaaaatagtgaaatccaaggctaggataccgtttggcggatttatggcgcgctatgct
attgatgatatttaccacgctatcgctcaagcacgcactgctttagtgtttgtcaatacg
cgagcacaagctgagatgctattccaacatttatgggaagccaatacacaggcgctgccc
attgcgctttaccatggctctttgagtaaagagcaaaggcgaaaaacggaatccttgatg
gctactggagaactacgagctgtagtgtgtacgtcagcacttgagcttgggatcgactgg
ggggatgtggataaagtcattcaagttggcgcgcctaaaggggtaagccgtttactccag
cgaataggccgagccaaccatagattggatgaaccgagtgatgcgcttcttgtgccagca
aataggtttgaggcgctagagtgccaggcggcgattaccgcgatcaaaaaagggcagcta
gatggtgagtctccccagcccggggcgatggatattatccctcagttcatactaaattgt
ttgtgtagttaccctagtacacctgaagcgctgtataaagaaatactaaacgccacgccc
tatcaagggttggacaaagacgactttaacaaattgtggcaattcacccttgatggcggt
agcgccttaaatgcctatgaacgataccaacggctgactaaaaataacgatggcacctat
tcgcccgcgaacaagcgagtgattcagcggcaccggcaaaatataggtaccatagtcgaa
gcaggaagattaaaagtaaagcgcattcggcggggcaatcaaggtaaagttatcggcgaa
gttgaagagtatttcgcgcaacagttagtgccaggagataccttttactttgcggggcaa
gtacttaaatttgaggctatccgcgacatgcaattacatgcaaaaccggcgaatgcgaaa
gaagcaaaaataccgagttatgccggagggcaaatgcccttatctacgttcttagccgac
ggcgtaagggatattcttgctagcccttccatgtggcgtaatttacccgcgcaagtgaaa
gagtggttaggcttgcaacaagctttctcaaccttaccgtctccagggcaactgttggtt
gaacaatttccatttagacaaacccattacacgcttttttatacctttgatggcagaaag
gccaaccaaaccttaggcatgttaattacccggcgtatggaaaagatgggcattaagccg
ctgagttttagtgtgacagactatgggctgtcgattagcgcggtaaatcgtattagtgag
gcgcagcttaccaccttatttcaaccggatattttaggcgatgagttagaagattggatg
ttacaggcgccaatgctgaagcgttcattcaggcaggtggctgtggtgagtggattaacg
gagcagcgctaccatgcggcgcaaaaaaccatgaagcaagtcactttctcaaccgattta
atttacgatacgctgagagagcacgaccccgaccatatcttactaaccgtagcccgagca
gatgctgagcgtgagctgctggacataaagcgcttagcgaatttgcttattcggtatgta
ggcaaaaccacattagtcaaccttgaaaaggtgtctcctatggccattcctattgtttta
gatgtaagaagtgagcaaataaagggggctggcgcccacgccatgctagaacaagctaac
ttgtatgccgaagcggaaagtatgctggatgaagtacgggcgcttttgtcataa

DBGET integrated database retrieval system