Alteromonas sp. B31-7: IUA53_19155
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Entry
IUA53_19155 CDS
T11045
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
altb Alteromonas sp. B31-7
Pathway
altb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IUA53_19155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
altb03000
]
IUA53_19155
03400 DNA repair and recombination proteins [BR:
altb03400
]
IUA53_19155
Enzymes [BR:
altb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
IUA53_19155
Transcription factors [BR:
altb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IUA53_19155
DNA repair and recombination proteins [BR:
altb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IUA53_19155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Nuc_recep-AF1
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QPL49900
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Position
complement(4378195..4379598)
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AA seq
467 aa
AA seq
DB search
MLANSASDTEEQWRVYAQARLSRDSRFDGRFFVAVKSTGIFCRPICPAKLPLEKNVEYFE
HATQALHHGYRPCLRCRPDSAPSSFAWQGVTTTVKRGISLLSHIPSQPVSHVAERLGISE
RYLNKLLQSGLGLSAKQYQSLHRVLFAKQLLQQTEMTVDDVALSAGYGSSRQLQRAVQQY
CRTTPSALRKSVKGNAPTVTLRLAYLPPYNWPQVRDFLKMRAIEGVEAVSDNSYQRYIRV
KGEVGRIKATHNAHANGFDIELRLPSLDGLHSIIEKIKGVLDLHADPQLIKASLHGAGLP
LALIDEGIRLPGTWDVFESGCRAIVGQQVSVKAAIGQASLLAKQLHSPIGTVTCPGFAFP
SPQQVASSDVSFLRMPNARKQALISFASLFAQQPSGTTPEDDAIMAIKGVGQWTLDYIKM
RGEKDPDVYLAGDLIVKKMAAKYPVSAEKAAPWRSYLTLQLWELSKR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttagccaacagcgcaagcgatactgaagagcaatggcgtgtttacgcacaagcgcga
ttaagccgagacagtcgcttcgatggccgcttttttgtggcagtgaagtctaccggcata
ttttgccgtccaatctgcccagcgaagttaccactagaaaaaaacgtggagtattttgag
catgccacgcaagctttgcatcatgggtaccggccctgtttgcgctgtcggcccgacagc
gcgccaagctcattcgcgtggcagggtgtcaccactaccgtaaaaaggggtatctcgttg
ctaagccatattccttcccaacctgtcagtcatgtagcggagcgattagggattagtgaa
cgctatctcaacaagctgctgcaaagtgggcttgggctatcggcaaagcaatatcaaagt
ttacatcgtgttttgtttgccaagcagttattgcagcaaaccgaaatgacggtagatgat
gtggccttaagtgctggctatgggtcgtctcgtcagttgcagcgcgccgtgcagcagtat
tgtagaacaaccccctcagcactgcgtaaatcggtaaagggcaatgcacccaccgtaaca
cttagactggcctatcttcccccgtacaattggccacaagtccgagactttttaaagatg
cgtgccattgagggcgtggaagcggttagcgataatagctatcaaaggtatattcgcgtg
aagggggaagtggggcgaataaaagcgacccataatgcccatgctaatggctttgatatc
gaattgcgcttaccttcgttagacgggctacacagtattattgaaaagataaaaggcgta
ctggatttacatgcagacccacaattgattaaagccagccttcatggtgctgggctacct
ttagctcttattgatgaggggattcgcttaccgggcacgtgggacgtatttgaaagtggt
tgtagggccatagtggggcaacaagtcagtgtaaaagcggccatagggcaagcttccttg
ttagccaagcaactgcattcacccataggtaccgttacatgccctggctttgcattccca
tcgccgcagcaggtggcaagcagtgatgtgtcttttttgagaatgcctaatgcacgaaag
caagcactgatatcttttgcgtcgctctttgctcaacaaccaagtggtaccaccccagag
gatgatgccattatggcaataaaaggtgttggtcaatggacactagattacattaagatg
cgtggggagaaagaccctgatgtgtatttagcgggcgatcttattgttaaaaaaatggcg
gcgaaatatccggtttcagctgaaaaagcagcgccttggcgcagttatctcaccctacaa
ttatgggagttaagtaagcgatga
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