Altererythrobacter arenosus: P7228_07540
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Entry
P7228_07540 CDS
T10597
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
altc Altererythrobacter arenosus
Pathway
altc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
altc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
P7228_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altc03019
]
P7228_07540
03009 Ribosome biogenesis [BR:
altc03009
]
P7228_07540
04131 Membrane trafficking [BR:
altc04131
]
P7228_07540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
altc04147
]
P7228_07540
Messenger RNA biogenesis [BR:
altc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
P7228_07540
Ribosome biogenesis [BR:
altc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
P7228_07540
Membrane trafficking [BR:
altc04131
]
SNARE
SNARE associated proteins
Others
P7228_07540
Autophagy
Aggrephagy
Other aggrephagy associated proteins
P7228_07540
Exosome [BR:
altc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
P7228_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
CDC48_2
AAA_5
AAA_2
AAA_33
AAA_14
TIP49
IstB_IS21
AAA_7
nSTAND3
RNA_helicase
AAA_28
NPHP3_N
AAA_18
Mg_chelatase
AAA_lid_PRS2_C
NACHT
ABC_tran
AAA_17
DUF815
AAA_3
AAA_24
Parvo_NS1
Sigma54_activat
AAA_11
AAA_30
AAA_19
TsaE
Zeta_toxin
NB-ARC
AAA_25
ATPase
Bac_DnaA
SLFN-g3_helicase
PhoH
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
WFL78906
LinkDB
All DBs
Position
1519324..1521666
Genome browser
AA seq
780 aa
AA seq
DB search
MADADAATKDKTDEKTVRLQVAAARQEESGQGIARMPRSAFQALGITEGDVVEVTGKRST
AAIAMAAYSEDEALDVVRLDGLQRGNAEVGSGEHVKIARAESRPATRVVFAPAQREMRLQ
GPGQALKRNFFGKPLVAGDLVATTGQQPVQNMPPDVRQLLRTPAYALTQIRLSVVSTTPK
GIVHIDENTEVELRAEFEEPRDARAVVNYDDVGGMGDTIQQLREMVELPLRYPELFTRLG
VDPPKGVLLHGPPGTGKTRLAQAVANESDAEFFTINGPEIMGSGYGDSEKALREVFEQAS
KSAPAIIFIDEIDSIAPKRDRVPGEAEKRLVAQLLTLMDGLEARANLVVIAATNRPDAID
EALRRPGRFDREIVIGVPDEKGRREILSIHTRGMPLGDKVNLDELARVTHGFVGADIAAL
SREAAIEAVRRIMPKLDLDERTIPPEVLEELCVTREDFLSALKRIQPSAMREVMVQVPRV
SWDDIGGVGDAIDKLKEGIELPLKNPDAFMRLGIRPAKGFLLYGPPGTGKTLLAKAVAKE
AEANFISMKSSDLLSKWYGESEQQIAKMFQRARAVAPCVIFIDEIDSLVPARGSGQGEPQ
VTGRVVNTILAEMDGLEELQSVVVIGATNRPALVDPALLRPGRFDELVYVGTPDKEGRKH
ILEIHTEGMPLAKGVDLGAIAAKTERFTGADLEDVVRRAGLNALRRVGGEVKEVAKEDFD
AALEDSRATVTSQMEAEYKKMRGELKKRAAEVNPIGFIHEGMVEPTRNRKHSEPGDSGIE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcggatgccgcgacgaaggacaagaccgacgaaaaaaccgttcggctccag
gtagcagcggcccggcaggaagaatcggggcagggtatcgctcgcatgccgcgttcggcg
ttccaggcgctgggtatcaccgagggtgacgtggtcgaagtcacaggcaagcgctcgacg
gccgcgattgcgatggcagcctatagcgaggacgaagcgctcgacgtcgtccgtctcgac
ggtctgcagcgcggcaatgctgaagtcggttcgggcgagcatgtgaagatcgcccgcgcc
gaatcgcgcccggcgacacgggtcgtcttcgcccccgcccagcgcgagatgcggctgcag
gggccgggccaggcgctcaagcgcaatttcttcggcaagccgctcgtggcaggcgacctc
gtcgccaccaccgggcagcaaccggtgcagaacatgccgccagacgtgcgtcagttgctg
cgcacccccgcctatgcgctcacccagatccgcctctccgtcgtctcgaccacgcccaag
ggcatcgtccatatcgacgagaataccgaggtcgaactgcgggccgagttcgaggaaccg
cgcgatgcccgcgccgtggtcaattacgacgacgtcggcggaatgggcgacaccatccag
cagttgcgcgaaatggtcgagctgccgctgcgctatcccgagctgttcacccgcctgggc
gtcgatccgcccaagggcgtgctgctgcacggcccgcccggaaccggcaagacccggctg
gcgcaggccgtggccaacgaaagcgacgccgagttcttcaccatcaacggccccgagatc
atgggatcgggctatggcgacagcgagaaggcgctgcgcgaagtgttcgaacaggcgagc
aagtcggcgcccgcgatcatcttcatcgacgagatcgattcgatcgcgcccaagcgcgac
cgcgtccccggcgaggccgagaagcgcctggtcgcgcaattgctgacgctgatggacggt
ctggaagcgcgggcgaacctggtcgtcatcgcggccaccaaccgccccgatgcgatcgac
gaggcgctgcgtcgacccggtcgcttcgaccgcgagatcgtgatcggcgtgcccgacgag
aagggtcggcgcgagatcctcagcatccacacccgcggcatgccgctgggcgacaaggtc
aatctcgacgagcttgcccgcgtgactcacggcttcgtcggggccgatatcgcggccctg
tcgcgcgaggcggcgatcgaagcggtgcgccggatcatgcccaagctcgatctcgacgag
cggacgattccgccagaagtgctcgaggaactgtgtgtcacgcgcgaggatttcctctcg
gcgctcaagcgcatccagccttcggccatgcgcgaagtcatggtgcaggtgccgcgcgtg
tcgtgggacgatatcggcggcgtcggcgatgcgatcgacaagctcaaggaagggatcgag
ctgccgctcaagaaccccgatgcgttcatgcggctgggcattcgcccggccaagggcttc
ctgctctatggtccgccggggaccggcaagacgctgctggccaaggcggttgccaaggaa
gccgaagccaatttcatttcgatgaagtcgagcgatctgctgtcgaaatggtacggcgaa
agcgagcaacagatcgccaagatgtttcagcgcgcgcgtgccgttgcgccctgcgtaatc
ttcatcgacgaaatcgacagcctcgtgccagcgcgcgggtcgggccagggcgaaccgcag
gtgaccggacgggtggtcaacaccatccttgccgagatggacggtctcgaggaattgcag
tcggtggtcgtcatcggcgcaaccaatcgcccggcgctggtcgatcccgcgctcctacgc
cccggccgcttcgatgaactggtctatgtcggaacgcccgacaaggagggccgcaagcac
atcttagagattcacaccgagggcatgccgctcgccaagggcgtcgacctgggcgcgatt
gccgcgaagaccgagcgcttcaccggcgccgatctcgaggacgtggtgcgccgtgccggc
ctcaatgcactgcgccgcgtgggtggtgaggtgaaggaagtcgccaaggaagacttcgat
gccgcgctcgaggattcgcgcgccacggtgaccagtcagatggaagccgagtacaagaag
atgcgcggcgaactgaagaagcgtgcggcggaggtcaatccgatcggcttcattcacgaa
gggatggtcgagccgacccgcaaccgcaagcacagcgagcccggagacagcgggatcgag
tag
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