Altererythrobacter arenosus: P7228_13145
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Entry
P7228_13145 CDS
T10597
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
altc Altererythrobacter arenosus
Pathway
altc03410
Base excision repair
altc03430
Mismatch repair
altc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P7228_13145 (recJ)
03430 Mismatch repair
P7228_13145 (recJ)
03440 Homologous recombination
P7228_13145 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altc03400
]
P7228_13145 (recJ)
DNA repair and recombination proteins [BR:
altc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P7228_13145 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P7228_13145 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P7228_13145 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2529
Motif
Other DBs
NCBI-ProteinID:
WFL76927
UniProt:
A0ABY8FQ80
LinkDB
All DBs
Position
complement(2644431..2646218)
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AA seq
595 aa
AA seq
DB search
MASRALSPVFDVSSSLNGQAWHWRGASFGISGGIAGLEDDILTQLLLTRGVARDDIARHA
KPTLRDFLPDPSEFRDMDAAAERITQAILGGETITIYGDYDVDGATSAALLVSLLRDLGV
EAGYYIPDRLLEGYGPSGEALVRLGEEGSSLIVTVDCGAMAFDALKQARDAGVDVIVVDH
HKCAAELPLAAALVNPNRLDENDIASAHGHLAAVGVAFLLAIALVRTLRDRGYFAERSEP
DLMSLLDLVALGTVADVAALHGLNRAFVAQGLKVMARRERIGMAALIDASRLNRAPKSSD
LGFALGPRINAGGRVGESTLGVRLLTTEDPDEAREIAEQLSSLNEERRAIEAEVQQAAEE
QLSSQHNRAVQLLSGRGWHPGVIGIVAGRIKEKTGKPAIVIAVDEADGIGKGSGRSISGV
DLGAAIIAAREAELLVAGGGHAMAAGLTIEASKLEALGEFLDERLARQVTQARDGQQMQL
DLALAPGGLTPDLVETLERAGPFGVGWPGPRVAIGPVRIVKADIVGKDHLRIIAAGQDGR
SFKAIAFRAGETEMAQTLLHRSAGRLFHLAGRVKIDDWGTRPQAEMHLEDAAFAN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcgcgcgctatctcccgtattcgacgtatcctcctcgctaaacggacaggcc
tggcactggcgcggggccagcttcgggatctcaggcggaatcgctggccttgaggacgat
atcctcacccagctgttgctgacgcgcggggttgcgagagacgatattgcgcggcacgcg
aagccgaccttgcgcgactttcttccggacccgtccgaattccgcgacatggatgctgcc
gctgagcgtattactcaggccattctcggcggcgagacgatcacgatctacggcgattac
gacgtcgatggcgcgacgagtgccgcgctgctcgtcagcctgctgcgcgacctcggtgtc
gaggccggctattacattcctgatcgcctgctcgagggctatggccccagcggcgaggcg
ctggtccgactgggcgaagaagggtcgagcctgatcgtcacggtcgactgcggcgcaatg
gcgttcgatgcgctcaagcaggcgcgcgacgccggggtcgatgtgatcgtggtcgatcac
cacaagtgcgccgccgaacttcccctcgcggcggcattggtcaatcccaaccggctcgac
gagaacgacattgcgagcgcgcacggacatctggcagcggtcggtgtcgcatttctgctc
gccatcgcgctcgttcgcacgttgcgcgaccgcggctacttcgccgagcggtctgagccc
gacctaatgagcctgctcgatctcgtggccttgggcaccgtcgcagacgtcgccgccctt
catggactcaatcgagcctttgtcgcgcaagggttgaaggtcatggcgcgccgcgagcgg
atcggcatggcggcgctgatcgacgccagtcgtctcaaccgcgcgccgaagtcgagcgac
ctcggtttcgcgctgggcccgaggatcaacgcgggcgggcgggtcggggaatcgacgctc
ggcgtaaggctgctcacgaccgaggaccccgatgaagcgcgcgagattgccgagcagctt
tcatccctcaatgaagagcgtcgcgcgattgaggccgaggtccagcaggcggcggaagaa
cagctttcgagccagcacaaccgcgccgtccagctcctatcgggccgcggctggcacccg
ggtgtaatcggaatcgttgcgggcaggatcaaggagaagaccggcaagccggcgatcgtc
atcgcggtcgacgaggccgacgggatcggcaagggatcgggccgctccatttcgggcgtc
gacctgggcgctgcaatcatcgctgcgcgcgaggccgaattgctggtagctgggggtggc
catgcaatggcggctggattgaccatcgaagcaagcaagctcgaagcgcttggcgaattt
ctcgacgagcggctcgctcgccaggtcacccaggcccgcgacggccaacagatgcaactc
gatcttgcgctcgcccccggcgggctgacgccggacctagtcgagaccctcgaacgggca
ggtcccttcggggtcggatggccgggaccgcgggtcgccattggccccgttcgaatcgtc
aaggccgacatcgtcggcaaagaccatttgcgaatcatcgccgcggggcaggatggccgg
tcgttcaaggctatcgcatttcgcgccggggaaacggagatggcacagacgctccttcat
cgctctgccgggcgactgttccacctcgcaggacgcgtcaaaatcgacgattggggaacg
cggccgcaggccgaaatgcatttggaagacgccgctttcgcgaattga
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