Altererythrobacter arenosus: P7228_15085
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Entry
P7228_15085 CDS
T10597
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
altc Altererythrobacter arenosus
Brite
KEGG Orthology (KO) [BR:
altc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altc03032
]
P7228_15085 (topA)
03400 DNA repair and recombination proteins [BR:
altc03400
]
P7228_15085 (topA)
Enzymes [BR:
altc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P7228_15085 (topA)
DNA replication proteins [BR:
altc03032
]
Prokaryotic type
DNA Topoisomerases
P7228_15085 (topA)
DNA repair and recombination proteins [BR:
altc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P7228_15085 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WFL77294
LinkDB
All DBs
Position
complement(3033338..3035866)
Genome browser
AA seq
842 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGSDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQS
RFKEIADAAKNASRLVLATDPDREGEAISWHVKELLAKRKALPAKVDRVTFNAITKNAVT
EAMKSPRELDTDLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLICERE
HEIEIFRPDEYWSVIAKLAHDGTDFDARLVRFNGEKLDKLTLGNEGSAMAAKAAVEGARF
TIEDIETKPLKRNPAPPFTTSTLQQEAARKLGFSASHTMRCAQSLYEAGAITYMRTDGVQ
MDPGAINALRDAIGSRYDKSYLPEKPRFYSTKAKNAQEAHEAIRPTNFERDHAGSGDEAK
LYTLIFKRAMASQMSAAQLERTTVTLRDPTGQHELRATGQVVKFPGFLAVYQEGFDENSD
DDEDGLLPTMHKGDCPHKKAVEANQHFTQPPPRYSEASLVKRLEELGIGRPSTYASTIQT
LRDRDYVRMEKNRFFAEESGRLLTAFLERFFPTYVAYDFTAGMEDELDTVSDGREAYKDL
LAKFWKDFKPKADEVMEKMPSEVTEVLDEYLSDFLFPASEDGGDPRACPLCRDEGREGGK
LALRGGRYGAFIACANYPECKYTRRFAQPGGNGNGDDGAEDGIMGTDPETGAQIHRKTGR
FGPYIEMEVDGAKKRASIPKDLDDFDLEWAIKLLNLPRIVGAHPETGKEIEAAIGRYGPY
LRHDGKYGKLSNTREVFDVGMNRAVDILAQAANRGGGGRGKAEPIKVLGAHPTSGGEIKV
MPGRYGPYVTDGTTNATIPKDVKPEDVTEAQAIELIDARAAKGPAKKKRRKSPAKKKAAS
AK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgtaatcgttgagtcgccagccaaggcgaagacaatcgaaaaatacctgggt
tcggacttcaaggtcctggccagctacggtcacgttcgcgacctgccgcccaaggatggc
agcgtacgtcctgacgaggactttgcgatggattgggaactctatcgcgacaagcagagc
cgcttcaaggagatcgccgacgccgcgaagaatgcctcgcgcctcgtcctcgcgaccgac
cctgatcgtgaaggcgaagcgatcagctggcacgtcaaggaactgctagcgaagcgcaag
gcactgccggcgaaggtcgaccgggtcactttcaacgcgatcaccaagaatgcggtgacc
gaggcgatgaagagtccgcgcgaactagataccgacctgatcgacgcctatctcgcgcgc
cgtgcgctcgactatctgttcggctttacgctctcgcccgtcttgtggcgcaagcttccc
ggcgccaagtcggcggggcgggtccagtcggtggcgctgcggctgatctgcgagcgcgag
cacgaaatcgagatcttccggcccgacgaatactggtcggtcatcgccaagctggcgcat
gatgggaccgatttcgatgcgcggctggtgcggttcaacggcgagaaactcgacaagctg
acgctcggcaacgagggcagcgcgatggcggccaaggcggcggtcgagggtgcgcgcttt
accatcgaggatatcgagaccaagccgctcaagcgcaatccggcaccgccctttacgacc
tcgaccctgcagcaggaggctgcgcgcaagcttggcttctcggccagccacaccatgcgc
tgcgcccagtcgctctacgaggcaggcgcgatcacctacatgcgtaccgatggcgtgcag
atggacccaggtgcgatcaatgcgctgcgcgatgcgatcggcagccgctacgacaagagc
tacctgcccgagaaaccgcgcttctattcgaccaaagccaagaacgcgcaggaagcgcac
gaggcgatccgtccgaccaatttcgagcgtgaccatgcgggttcgggcgacgaggccaag
ctctatacgctgattttcaagcgcgcgatggcgagccagatgtcggcggcgcaactcgaa
cgcactaccgtcaccctgcgcgacccgaccggccagcacgaattgcgcgcgaccggccag
gtggtgaagttcccgggattcctcgcggtctaccaggaaggcttcgacgagaattcggac
gatgacgaggacggcctgctgccgaccatgcacaagggcgattgcccgcacaagaaagcg
gtcgaggccaaccagcatttcacccagccgccgccgcgctattccgaggcctcgctggtc
aagcggctcgaggaactcggcatcgggcgtccctcgacctatgcctcgaccattcagact
ctgcgcgaccgcgactatgtgcggatggagaagaaccgcttctttgccgaggaatcgggt
cgcctgctgaccgctttcctcgagcgcttcttcccgacctatgtcgcctatgacttcacc
gcggggatggaggacgagctcgacaccgtgtcggatgggcgtgaagcctacaaggacctg
ctcgccaagttctggaaagatttcaagccgaaggccgacgaggtaatggagaagatgccc
tcggaagtgaccgaggtgctggacgaatatctctccgattttctcttccccgcaagcgaa
gatggcggcgacccgcgcgcctgcccgctgtgccgcgatgagggccgcgagggcggcaag
ctggcgctgcgtggtgggcgctatggcgccttcatcgcctgcgccaactatcccgaatgc
aagtacacccgccgcttcgcccagccgggcggcaacggcaatggcgacgatggcgcggaa
gacggcatcatgggcaccgatcctgagacgggcgcgcaaatccatcgcaagaccgggcgc
ttcggaccatatatcgagatggaagtcgatggcgcgaagaagcgcgcctcgattcccaag
gatctcgacgatttcgatctcgaatgggcgatcaagttgctgaacctgccacggatcgtg
ggcgcacatccggaaacgggcaaggagatcgaagcggcgatcggtcgttacggtccctat
ctgcgccacgatggcaaatacgggaaactgtcgaacacgcgcgaagtgttcgacgtcggc
atgaaccgcgcggtcgatattctcgcccaggcggccaatcgcggcgggggagggcgcggc
aaggccgaaccgatcaaggtgctgggcgcgcacccgacttcgggtggcgagatcaaggtc
atgccggggcgctacggtccctatgtcaccgatggtacgaccaacgccacgatccccaag
gatgtgaagcccgaggacgtgactgaagcgcaggcgatcgagctgatcgatgctcgcgcc
gccaaggggccggccaagaagaagcgacggaaaagccccgcgaaaaagaaggcggcaagc
gcaaagtaa
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