Alteromonas sp. D210916BOD_24: D210916_02690
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Entry
D210916_02690 CDS
T11344
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
altd Alteromonas sp. D210916BOD_24
Pathway
altd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D210916_02690 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altd03019
]
D210916_02690 (rppH)
Messenger RNA biogenesis [BR:
altd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D210916_02690 (rppH)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
BFT29093
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All DBs
Position
301283..301825
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AA seq
180 aa
AA seq
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MIDADGFRANVGIVICNKMGQVFWARRYGQHSWQFPQGGIDEGESAEQAMYRELHEEVGL
TPKDVTILSVTRNWLRYKLPKRLIRQGSNPVCIGQKQKWFLLQLECNEKDVNVLKTGHPE
FDDWRWVSYWYPIRNVVSFKRDVYRRVMKEFSGVAMSTQHRAPQRPNAGMLKRGKKRRRG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatgccgatggattccgtgcgaatgtgggcatagtgatttgcaacaaaatgggt
caagtattttgggcaagacgttatggtcaacattcatggcagttccctcaaggcggaatt
gatgaaggggaatctgctgaacaagctatgtaccgcgagcttcacgaggaagtagggctg
acaccgaaagatgtcactattttaagtgttacccgtaactggcttagatataaactgcca
aagcgattaattcgccaaggtagcaaccctgtctgtattggacaaaaacaaaagtggttc
ttgttgcagcttgaatgcaacgagaaagatgtcaatgtacttaaaactggtcatcccgag
tttgatgactggcgatgggtaagctactggtaccctattcgcaatgttgtgtcgtttaag
cgtgacgtttatcgcagagtgatgaaagaattctctggggtagcaatgtctacgcaacac
cgtgctcctcagcgccccaatgcaggtatgcttaaaaggggtaaaaagcgcagacgtggc
taa
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