Alteromonas sp. D210916BOD_24: D210916_02790
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Entry
D210916_02790 CDS
T11344
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
altd Alteromonas sp. D210916BOD_24
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
altd03021
]
D210916_02790 (rapA)
Transcription machinery [BR:
altd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D210916_02790 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Flavi_DEAD
Cas3-like_C_2
C45G9_3rd
Rv2240c
Motif
Other DBs
NCBI-ProteinID:
BFT29103
LinkDB
All DBs
Position
complement(312766..315609)
Genome browser
AA seq
947 aa
AA seq
DB search
MSLESQFAVGQRWLSNTETELGLGAIIGVDFRSVEVLYPATGDARIYTKQDAPLTRLIFE
IGDTVKSQDGWEMTVTDREESQGVYIYHGLREDTKAQTRLPETMLDHHIRLNQPEKRLFS
QQLDHPKWFDLRERALDYQYEYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLAD
EVGLGKTIEAALIIHQQLKTGRAERVLILVPDSLVHQWLVEMLRRVNLPFAIYDESRCEA
LESSEAQDDNQPNPFENDQLVLCSIDFISQSQKRQQQILAADWDVMVVDEAHHLAWSSDA
PSPEYLCVEALANQTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYDAFLQEEAKYSQ
LADAVAPLLSDVEPNDKQRSKLTELAPDVMEHAGDLTCAQTRHSLLHQLIDCHGTGRMLF
RNRRANIEGFPERKLSAYELALPDVYNEAVSGGDLTYSLYPERMASVVNNWTKHDPRVAW
LVDFMQSVKPAKILLICASARTAQELGEVIRTQTGIRHSVFHEGMSIVERDKAAHYFADD
EDGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIGRLDRIGQTQTVHIHVPYL
AHTAQHVLLDWYHEGLNAFEKTCPTGAGVFDDVKPLLIGACLHPEDTSARDELVNMSVTL
NSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIIALDSEQDLARFMGRVFDAIGVQQDEK
GNDCFILMPTESMVSQLPGLDPEGMTVTYKRRVATTLENVQFLSWDHPLVHTAIDVVLTD
VHGKSSIGFIAEPSLPKGAYWIEALFVLHAQAPKSLQLGRFLPQTPVRICLDAQGNTSDL
SFDVKRKVGHKISAQLIKALHQPLELAIEKARKLAHQQANQKQHDALHTMHTTLNEEIQR
LRDLQKRNPAVRDSEIAFIETQMLALDKVIQDADVQLDALRIVVNNP
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagaaagtcaatttgcagttggtcaacgctggttaagtaatacagagacagaa
ctggggttaggcgcgattattggcgtcgacttccgctcggttgaagtactttaccctgcc
acgggtgatgcgcgcatctatacgaaacaagacgcgccgttgaccagacttatcttcgaa
attggcgatacagtaaaaagtcaggatggatgggaaatgaccgtcactgatagagaggaa
tcacaaggcgtatatatttatcacggcttacgggaagacactaaagctcagactcgcctt
cccgaaaccatgctggatcatcatatccgcttaaaccaacctgaaaagcgcttatttagc
caacaactagatcaccctaaatggtttgaccttcgcgaacgcgcactcgactatcaatac
gagtatcttcgctccagtacaatcggactggcgggggcgcgaatttcactgatcccacac
caattgcatattgcatcggaagtgggcggccgccatgcacctcgggttttactcgccgat
gaagtagggctgggtaaaaccatcgaagcggcactgattattcatcaacaattaaaaacc
ggtcgcgctgaaagggtgctcattttggttcccgactctctggtacaccaatggctggta
gaaatgttacgtcgagtcaatcttcctttcgccatttatgatgaaagccgttgtgaggca
ttagaatccagcgaagcccaagatgacaaccagcctaacccgtttgaaaatgaccagctt
gtgctgtgcagtattgactttataagtcaaagtcaaaaacgccagcagcagatccttgca
gctgactgggatgtaatggtggtcgatgaagctcaccacctcgcctggtcgagcgacgcc
ccctcaccagaatacctgtgtgtagaagcgctcgccaaccagactcccggagtgctgtta
cttaccgccacgccagatcaacttggacacgaaagtcattttgcccgccttcgattatta
gatcctgcgcgtttccatagttatgacgcttttttacaggaagaagctaaatacagccag
ttggctgatgcggtagcccccttgttgtctgacgttgaacctaacgataagcagcgcagt
aaattaacggaacttgccccggatgtaatggaacatgcgggcgacctaacctgtgcacaa
acgcgtcacagtttactccaccagctaatcgactgccacggaacagggcgtatgctgttt
aggaaccgacgcgccaacatcgaagggtttcctgagcgtaaactgagtgcctacgaactg
gctttacctgatgtgtacaatgaggctgtgtcaggcggcgatctcacttattcactttac
ccagagcgcatggcaagtgtggtaaataactggaccaagcacgacccaagagttgcatgg
ctagtggacttcatgcaaagcgtaaagccagcaaaaattctgctgatttgcgccagtgct
cgcacggctcaggaactgggcgaggtcattcgcacgcaaaccggtatacgccatagtgtt
ttccacgaaggcatgagtattgtggagcgagacaaagccgcgcattattttgccgatgac
gaagacggtgcacaaatcttactgtgcagtgaaatcggtagtgaaggccgaaactttcag
tttgcccatcatttggtactgtttgacttgcccattaccccagacttattagagcaacgt
atcggccgattggatcgcattggtcagacgcaaaccgtgcatattcatgtgccctatttg
gcccacactgcgcaacacgttcttttagattggtaccacgaaggtcttaatgcattcgag
aaaacctgccctaccggggcgggtgtatttgatgacgttaaacccttgctgattggggct
tgcctgcacccagaagatactagcgcccgtgatgaactggtcaatatgagtgtaacgctt
aacagtcaattggtagcacaactcgaagcagggcgggacagattgctagagctcaatgct
tccggggaaggccgtgtagagcagctccttgaagatattattgcgctggacagtgagcaa
gacctcgcgcgatttatgggacgagtatttgatgcaattggtgtgcagcaggatgaaaaa
ggtaacgattgttttattcttatgcccaccgagtctatggtgagtcagttacccggttta
gatccagaaggtatgacagtcacgtacaagcgccgtgtcgcaaccacactggaaaatgta
cagtttttaagttgggatcaccctttagttcacaccgccattgatgtcgttctcactgat
gtccacggtaaaagcagcattggctttattgccgaaccttcacttcccaaaggggcatat
tggattgaagccttgtttgtactgcatgcacaagcacctaaatcactgcagttagggcgc
tttttaccgcaaaccccagtgcgaatttgtttagatgcacagggcaatacttccgatttg
agcttcgatgttaaacgcaaagtgggacacaaaatatcagcgcaactgattaaagcgctc
catcaaccgcttgagctagcgattgaaaaagcccgtaaattggcccatcagcaagctaac
caaaagcagcatgatgccttacacactatgcatactacgttgaacgaagaaatacagcgt
ttacgtgatttacaaaagcgcaaccccgccgttcgtgacagtgaaatagcgtttatcgaa
acccagatgcttgcacttgataaagtaatacaagacgcggacgttcagctagacgccctg
cgcattgttgtgaataacccataa
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