Alteromonas sp. D210916BOD_24: D210916_05250
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Entry
D210916_05250 CDS
T11344
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
altd Alteromonas sp. D210916BOD_24
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altd03400
]
D210916_05250
DNA repair and recombination proteins [BR:
altd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D210916_05250
Archaeal homologous recombinant proteins
D210916_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
cobW
AAA_21
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BFT29349
LinkDB
All DBs
Position
603645..607403
Genome browser
AA seq
1252 aa
AA seq
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MRILTLRLKNLNALKGEWKVDFTQSPFVDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGPISTSNNDIMTRGTAECLAEVEFDIKGKAYRAFWSMRRARGNADGNLQSADVELAEVQ
SGKVLATQVRPKSEEIERLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTE
IYGQISQAVHQQFTEAKQKKNEFAVKLEGVTLLSEAQLSSLQQQLTDAKTQVAALNQTIE
DLHQQKQWQQGLEQNHLALTQAQNEKTQADDAIEKAHNELDKLKRSEPAESLRLPYEKVS
SLQQDLDTYQTRLNEKTTGLPEAQSNKQHALQAINQAEQGLREVKSYNMALEQRLAKDVI
PIDNDIDHTLKAQQASSDTLARHTEKLSSLQQQKTQSENSVAGQKAQLDALTHYVQENQV
LGTMAEHISGWAESARYIASEEDTINALEEKGKGTQRSLDNLKDKQQHVQQGVSQLTQDV
DREKHTLAQHHQKLDALLLSGDKASLARERDARYTQLDTLVQLEHTQQQYLSAVNEQRAL
TQQRQTQHETLTQQLAERNTLAEQYKQTRTLLKDIEALIALDAEVAHLRAQLKAGEPCPV
CGADEHPAANVSIDIPEAVIRRDDARQKLEDIEQRGAQAKDSANQTELALTQTDSQLQTL
ASTLESLNHKWHSLLTPFTQHQDEQGQPSQSQITQVLGDRQSDLLSLSIDDAEGLIACVS
HFKARGEAIKVQLEQIADGEAAVEKARARLHEANSTLLNKNSELQLLSQQVISLTEQCAN
DHAALVTKQEGVTTRTESLLESIAGLGVQVPRPEHLQTWLSDNVEAIKTYKHNQQQLVEL
TPHITAFNNKLIEINRDIGSVSAQLRDAQTQHATLASSLSALKEKRDKVFPEKDIEAERA
KAALAIEQAENSVNGCRAQYQLAENTVARLEAEIAQLQEQLTEKRNEHSHAKAQFDAQLA
SSPFDNEHAFTAALLDEDERKTLLNLQRTLTEAQQQARIRLDNAKTQQDTLYSHPQAAKW
QAVIDEHGVGWVTSCLNQHMQQKDALLSGVGQLEQQLTANNQAREKQQQLLDEMAAFETY
YDDITYLHSLIGSASGDKFRRFAQGLTLDNLVQLANQQLDKLHGRYQLARKENEGLSLSV
LDTWQGDVERDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDV
ALDALDNLNASGKMIGVISHIEAMKERIPTQLKVIKRNGVGLSALEKPYAVG
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagaatacttaccttacgccttaaaaacctgaacgcgctaaagggtgagtggaaagtc
gatttcactcaatccccctttgtggataacggacttttcgccatcacaggtcctactggg
gcgggtaaaaccactttgctcgatgctatctgtctggcgctctatcaccaaacacctcgc
ctgggacccatatcgacgtcaaataacgacattatgacgcggggaaccgctgagtgtttg
gctgaagtggagtttgacattaagggcaaagcgtaccgagcgttttggagtatgcgaaga
gcaagaggaaatgcagacggtaatttgcaaagcgccgatgtggaactggctgaggtacaa
agcggtaaggttttagccacgcaggttaggccgaaaagcgaagaaattgagcgactaacc
gggcttaattttgcgcgctttaccaagtcgatgatgttgtctcaaggggactttgccgcc
tttcttaatgccaacgaaggggatcgtgctgaactgttagaagagctgacgggcacggaa
atatacggtcaaatttcgcaagccgtacatcagcagtttaccgaggcaaagcaaaaaaag
aatgagtttgcggtaaagctcgaaggcgtaaccctattaagtgaagcgcaactctcttca
ttacagcagcagttaactgacgccaaaacccaagttgcagcccttaaccaaaccattgaa
gatttgcatcaacaaaagcaatggcaacaagggcttgagcaaaatcatttggcgctgacc
caggctcaaaacgaaaaaacacaggccgacgatgccattgagaaggcacacaacgagctt
gataaattaaaaagaagcgagcctgctgaaagtttaaggctgccctatgaaaaagtcagt
tcactgcagcaggatctggatacctatcaaacccgtttaaatgaaaaaacgacgggattg
ccagaagcacaaagcaataagcaacacgctctacaagccattaaccaagcagagcaaggc
ttacgcgaggtaaaatcatacaatatggctcttgagcagcgcctggccaaagacgttatt
cccattgataatgacatagaccacacgctaaaagcgcaacaagcgagcagtgacacacta
gcccgtcataccgagaaattgagttcactacagcaacaaaaaacacaaagcgaaaatagt
gttgccggtcaaaaagcacaactcgacgcactgacacattacgttcaggaaaaccaggtg
ctcgggacaatggctgagcatatcagcgggtgggctgaaagcgcgcggtatattgccagt
gaagaagacacgattaatgcgttggaagaaaaaggcaaaggcacccagcgttctttagat
aacctcaaagacaagcagcaacatgtccaacaaggggtcagtcagcttactcaagacgtc
gaccgcgaaaagcacactcttgcacagcatcaccaaaaactggatgcgctgctgctaagt
ggagataaagcaagtttagcccgagaaagggacgcccgatatacgcaactagacacgctg
gttcaacttgaacatacgcagcagcagtacttatcggctgtaaatgaacagcgcgcgtta
acccagcaaaggcaaactcaacatgaaaccctgacgcaacagcttgctgagcgcaacaca
ctggctgaacaatacaaacaaacgcgaacgttgttaaaagacattgaagcactcattgca
ttggatgcagaagtggcgcatttgcgagcacagttaaaagcgggagagccgtgtccggta
tgtggagcagacgagcatcctgcggcaaatgtgtcgatagacattccagaggccgttatt
cggcgggacgatgccagacaaaagctcgaagacatagaacaacgtggcgcgcaggcaaaa
gacagtgccaaccagacagagttggcccttacgcagacagacagccaactgcaaacccta
gcgtctacgttagaaagcctaaaccataaatggcatagtctgcttacgccttttacccag
caccaagatgaacaggggcaacccagtcaaagccaaattacgcaggtgttgggtgacagg
caaagtgacctgttatcgcttagcattgatgacgctgaaggactgattgcgtgtgtgagc
cattttaaagcgcgtggtgaagccatcaaagtgcaactagaacagatagcagacggggaa
gcagcggtagaaaaagcgcgagctagattacatgaggccaatagcacgttactgaataaa
aacagtgaactgcaactcctttcacagcaagtcattagtttaacagagcaatgcgccaat
gatcatgcggcgctcgttaccaagcaagagggcgttaccacgcgcacagaaagcctgcta
gaaagtatcgctgggttaggtgtgcaggtgcctcgtccagagcacctacaaacatggctg
tctgataacgttgaggcaataaaaacctataagcacaatcagcagcagctagttgaactc
accccacacattacagcgtttaacaataaactcatcgaaattaaccgtgatatagggagc
gtgtctgcacagctacgcgatgcacaaacacaacacgccaccctcgcttcaagtctatcg
gcactgaaggaaaagcgcgacaaggtctttcctgaaaaagacattgaagcagaaagagcg
aaagcggcactggctatcgaacaggcagagaacagcgtaaatggctgtagagcacaatat
caactagcagaaaacacagtggcccggttagaagcagaaatagcacagttgcaagagcag
ttaaccgaaaagcgcaacgagcatagccatgcaaaagcccagtttgacgctcagctagcg
tccagcccgtttgacaatgaacacgccttcaccgccgccttgcttgatgaagatgagcgc
aaaacactgctaaatttgcagcgcacattaacagaagcacaacagcaggcacgtatacgc
ctggacaatgcaaagacgcaacaagacaccctttactcccaccctcaggctgcaaagtgg
caagcggtgatagacgaacacggtgtaggctgggtaacaagctgcttaaaccaacacatg
cagcaaaaagacgcgttactctcaggggtaggccaacttgagcagcaacttactgcgaac
aaccaggcacgtgagaaacaacagcaattgctcgatgagatggctgcgtttgaaacttat
tacgatgatattacctacttgcactcgcttatcgggtcggccagtggtgataaattcagg
cgctttgctcagggactaacccttgataatcttgtgcagttggccaatcagcagctggac
aaattgcacgggcgttaccagcttgcacgaaaagaaaacgaagggctcagcttaagtgtg
cttgatacatggcaaggggatgtagagcgcgataccaaaaccctgtcaggaggcgagagc
tttttggtcagcctggcgttggcgctggcgttatcagatttggtcagtcataaaaccagt
attgattcactatttctcgatgaaggttttggtacgttagacgcagaaactcttgatgta
gcgctggatgcgctagacaacttaaacgccagcggcaaaatgatcggcgtgatcagtcat
attgaggcgatgaaagagcgtattcccacgcagcttaaagtgatcaaacgcaacggggtt
ggattaagcgcgctagaaaagccctatgcggtagggtaa
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