Alteromonas sp. D210916BOD_24: D210916_12110
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Entry
D210916_12110 CDS
T11344
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
altd Alteromonas sp. D210916BOD_24
Pathway
altd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D210916_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altd03400
]
D210916_12110
Enzymes [BR:
altd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D210916_12110
DNA repair and recombination proteins [BR:
altd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D210916_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecC_N
RecC_4th
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BFT30035
LinkDB
All DBs
Position
1412222..1415881
Genome browser
AA seq
1219 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLLKQQPTGVFTPETVLVESPGMQHWVSMQLAREQGIAMNID
FPLPVRFMWNTARAVLGEDKVPKQSSYRREVLTWRIDNILNDQEWMKGSAFEQVNKYWRG
AGSEQEQGVKRLQLATALADVYEQYLLYRPDWLFAWERNERVVFDDMEGWQSEIWRRLVS
EQPLHPARLHQLTLEALASGVVPNTLPERVVVFAINTMAPQLIGFFDALAHHIDIHIFHL
NPSVNYWGDAKSNSEQAKALRSEGLEKWMQQEQSNPLLGNLGKQGRELFNLLTELDTFEI
SAFDAPAFHRDDAQPLTGSGECPSLLNYIHDDILQGIQPAPVDKEGGETLTRASKQGDDS
ITIMCTHSALREVQVLHDHLLHWLSQDKTRTPSDILIMCPAIENYAPFVDAVFHRVSTKP
IVGAGPTRLPCSIADRSPMDAEPLIAAYMALLQLPDSRFGVADIMDYLQLDTVQKRFAIA
QGDLDQMTEWLKQAHIHWGLNRQHKLAVSEGVAHDDTYSWWWGLRRLLMGMLACDNEMII
DGMLTIPDVEGQSAVTLGKLVEIVALLGRFANALTTPRSPSEWAKDLLELRDACFMPTRE
QEHSWELIAKVAADLAARCEEANYEHPLSLRQVRELLLNRFSSPDAGNHFMTGQVTVCSM
LPMRSIPFKKVCILGLNDSEFPRKSTPLGLDLMANAARRIGDRSRRLEDRYLFLEAIIST
RESLYLSYQGNDVSNNSERQPSLVLAEFLDMLLLGYEVNVEDYLKQAPLHPFSEGSFNGT
LPSYETGWLRLADALQRARKVVQHDNDKGKDKDKDSTASTTDTETAHSLPLLDLHSNDSE
TGADSDLRLTPMQIARAFKDPLEYFAVQRLGVNLSQSFTLLENSEPFETNALIRYQVLDA
IFSSPERNAAEVGSNSTSYSEQVIEFAALRGDIPNNPVAKEELAMWKEGALALNQAMGPH
DAEPKTASFTGHYLTFTASAFETSEALVQLCAGKINDVRALSYFITQLVFSSSDHETHYR
DYPLDIFYCDWEKGETTLLKRRYDPFDPKTARQLLLFIERLYLTIYTAPTPLYRSLFEDL
IPGKRKSDSAEIVAQIKPECFHDILSGMIEYQRVTSNQATTQTTQKPQLLSGLHLVEDDV
ASEEGLAIIHKIKKLLAGYDAERVIRNWQQSSGPFSADMANNPYLNWLFPQPVTWHDLPS
VEGFVLFAMVANASVEEKL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgttatacccttcaaacaaactagaacacttaagttttctacttaccacatta
ttaaaacagcagcctacaggggtgtttacacctgaaactgtgctggtggaaagtcctggt
atgcagcattgggtgagtatgcaattggcacgggagcagggcatagcaatgaatatagac
ttccctttgccagtgcgctttatgtggaatacggcaagagcggtacttggggaagacaaa
gtgcccaaacaatcgtcctatcgacgcgaagtgttaacctggcggattgataatattctt
aacgatcaggaatggatgaaaggcagtgcatttgaacaagtaaacaagtactggcgtgga
gcaggtagcgagcaagagcaaggggtaaagcgtttgcagctagctaccgcgctagctgat
gtgtatgaacagtatttgttatatcgtccggattggctgtttgcgtgggaaagaaatgaa
cgtgtagtgtttgatgatatggaagggtggcaaagtgaaatctggcgccgcttagtcagc
gaacagcctttgcatcctgccagacttcaccaactcacccttgaagcgttagcgtcaggt
gtggtgccaaacacgctccctgaacgtgttgtggtgtttgccataaacaccatggctccc
caacttattggctttttcgacgccttagcccatcacattgatatacatatttttcactta
aaccccagtgttaactattggggtgatgccaaaagcaacagtgagcaggctaaagcgctt
cgcagtgaaggccttgaaaagtggatgcagcaagaacagtcaaacccacttctgggcaat
ttgggtaagcaaggtcgagagcttttcaatttactgactgaacttgatacatttgaaata
agtgcttttgacgccccagcgtttcatcgcgacgacgcgcagccattaacaggttcaggg
gaatgtccctcacttctcaattatattcacgacgacattttgcaaggtattcaaccagcg
ccagtcgacaaagagggaggtgaaacattaacccgagcaagtaaacaaggcgatgacagt
ataacaataatgtgcactcactctgcgctgcgggaagtccaggtactgcatgatcactta
cttcattggttgtcacaagataagacgagaacaccctctgatattttaattatgtgcccc
gcaatagaaaattatgcgccatttgtcgatgcagtgtttcatcgggtgagtaccaaaccg
atagtgggcgcagggcctacacgtttaccgtgctcaattgctgatcgcagtccaatggat
gctgagccattaatcgcggcttatatggcattgttacaacttcccgatagccgttttggt
gttgcagatattatggattatctgcaactggacactgtgcaaaagcgctttgcgattgcc
caaggtgatttagaccaaatgaccgagtggctaaagcaagcacatattcactggggttta
aacagacaacataagttagcagtatcagaaggcgtcgcgcacgatgacacctacagttgg
tggtgggggttacgccggttattgatgggtatgcttgcctgtgacaatgaaatgatcatt
gacggtatgctgaccattccagatgtagagggccaaagtgcggtaaccttaggaaaactg
gtagagatcgttgcgttattagggcgatttgctaacgcgttgacgacaccccgctcgcct
tctgagtgggcaaaagatttacttgagcttcgcgatgcgtgttttatgcccactcgggag
caagagcacagttgggaactcattgctaaagtggcggcagatttagctgcccgatgcgaa
gaagcgaactatgagcacccattgagtttacgtcaggtcagagagctattgctcaatcgt
ttttcttcccccgatgcgggtaaccattttatgacgggacaggttactgtgtgttccatg
ttacccatgcgaagtattccctttaaaaaagtgtgtattctgggtcttaacgacagtgaa
tttccccgaaaatcaacccctctggggttggatttaatggccaatgctgcgcgtcgtatc
ggagatcgttcaaggcgtttagaggaccgatacttatttttagaggcaataatttcaacc
cgcgaaagcttgtatctgagttatcaaggaaatgatgtgagcaacaatagcgagcgtcag
cccagcctcgtccttgctgaatttctcgatatgttgttgctaggctacgaggtaaatgta
gaggattacctgaaacaagcccccttgcacccatttagcgaaggaagttttaacggtaca
ttgccaagttatgaaaccggttggctgcgattggctgatgctctgcaacgtgccaggaag
gttgttcaacatgacaacgataaaggtaaagataaagataaagatagtacagcaagtacg
acagacactgaaactgcacattcattgcctttgttagacctgcattcaaatgattctgaa
acgggagcagatagcgatttgcgtctgactccaatgcaaattgcaagagcgtttaaagat
ccccttgaatactttgccgttcagcgcttaggggttaacttgtcgcaatcgtttaccttg
ttggaaaacagtgagccttttgaaaccaatgcacttatccgctatcaggttttagatgcc
attttctcatcccctgagcgcaatgccgctgaggtaggaagcaatagtacttcttatagt
gaacaggtgattgaattcgccgcgctgcgcggtgatattcccaataacccggtggcgaaa
gaagaacttgccatgtggaaagaaggcgcacttgcgttaaatcaggcaatgggcccccat
gatgcagagcccaaaaccgctagctttaccggtcactatctcacatttaccgccagtgca
tttgaaaccagcgaggcactggtgcaattgtgcgcagggaaaattaatgatgtcagggca
ttgagctattttatcacccaactcgtgttctccagtagtgaccatgagactcattaccgt
gattatccactggatattttttactgtgactgggagaaaggcgaaacgacattattaaaa
cgtcgctatgacccttttgatccaaagactgcccgtcaactgcttttgtttatcgaacgc
ttgtatctgaccatctatactgcgccaacgccgctttatcgcagtctcttcgaagatctc
ataccggggaaacgcaaatcggacagtgccgaaatagtcgcgcagataaagcctgaatgt
ttccatgacatactcagtgggatgattgaatatcagcgggtaacgagcaatcaagcaaca
actcagacaacacagaaaccacagttgcttagtggtttgcatctcgtagaagacgatgtg
gcctcagaagaggggttagcaataatacataaaataaaaaagttattggctgggtatgat
gctgagcgggtaatcagaaattggcagcaatcgtctgggccttttagtgccgatatggca
aataacccttaccttaactggctgttcccacagccagtcacctggcatgatttaccgtct
gttgagggcttcgtgttattcgctatggtggccaatgcctcggtggaggaaaaactatga
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