Alteromonas sp. D210916BOD_24: D210916_13800
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Entry
D210916_13800 CDS
T11344
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
altd Alteromonas sp. D210916BOD_24
Pathway
altd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D210916_13800 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altd03019
]
D210916_13800 (pnp)
03016 Transfer RNA biogenesis [BR:
altd03016
]
D210916_13800 (pnp)
Enzymes [BR:
altd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D210916_13800 (pnp)
Messenger RNA biogenesis [BR:
altd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D210916_13800 (pnp)
Transfer RNA biogenesis [BR:
altd03016
]
Prokaryotic type
tRNA degradation factors
D210916_13800 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
OB_RRP5_4th
S1_2
Ferritin
Motif
Other DBs
NCBI-ProteinID:
BFT30204
LinkDB
All DBs
Position
1611584..1613722
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AA seq
712 aa
AA seq
DB search
MKIEIKGQIVTPITKSFQYGQHTVTLETGVIARQATAAVLASMDDTSVLVTVVGKKEAKA
DQDFFPLTVNYQEKAYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFKNEVQ
VVVTVMSANPDIPTDIISMIGTSAALAISGIPFNGPIGAARVGYSNGEYILNTRAEEQAE
SELDLVVAGTQGAVLMVESEANVLSEDTMLGAVMFGHEQMQTVVNAVNEFAAQVGTEKWD
WTPEAENTALKDKVKALAEAEMTAAYQISDKLARKDAVVAATEKALAAIIAEDEAQDQKE
VLDLLHELESDVVRSRILSGAPRIDGRDPAMIRALDVATGILPRTHGSALFTRGETQALV
AATLGTERDAQMIDELQGKRDSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQ
AVMPSEEEFPYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSD
DNFVVLSDILGDEDHLGDMDFKVAGTTQGITALQMDIKIEGITKEIMQIALKQAKEARLH
ILNVMDEAMGGHREELSEFAPRIYTMKIDQDKIRDVIGKGGAMIRQITEESDTNIEIEDD
GTIKIFATERAKADIAINKIEQVTAEIEVGKTYHGKITRIVDFGAFVEVLPGKEGLVHIS
QIAHERVNKVTDYLEEGQMVDVKVMEIDRQNRVRLSIKELLEKPAPKSDDAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaaattaaaggacaaatagtgactcctattactaaatcatttcagtatgga
cagcatactgtaactctagaaacgggtgtgatcgcccgtcaggcaaccgctgcggttctt
gcaagcatggacgacacgtctgtactggtaacagtagttggtaaaaaagaagccaaagca
gatcaagacttcttcccacttactgttaactaccaagaaaaagcgtacgctgcgggtaaa
atcccaggtggtttcttcaagcgtgaaggtcgtccatctgagggtgaaacactgattgcg
cgtcttattgaccgtccaatccgcccacttttcccagaaggcttcaaaaacgaagtacaa
gttgttgttaccgtaatgtctgctaacccagatattcctaccgacatcatctctatgatt
ggtacttctgcagcccttgctatttctggtattcctttcaacggcccaattggtgcggca
cgtgttggttatagcaacggtgaatacattctaaatacacgcgcagaagagcaagctgaa
agcgagctagatcttgttgttgcgggtacacaaggcgcagtacttatggttgaatcagaa
gcgaacgtgctttctgaagacaccatgctaggtgcggttatgttcggtcacgagcaaatg
caaacggtagttaacgcggttaacgaatttgcggcgcaagtgggcactgagaagtgggac
tggacgccagaagctgaaaacacagcgcttaaagacaaagtaaaagcattggctgaagct
gaaatgacagcggcttatcagatttctgacaaactagcgcgtaaagacgcggtagtagca
gccactgaaaaagcacttgcagccattattgctgaagacgaagcgcaagatcagaaagaa
gtgctagacctacttcacgaactagagtctgacgttgtacgttcacgcatcctttctggt
gcgccgcgtattgacggtcgtgaccctgcgatgatccgtgcactagacgtagctactggc
attcttccacgtacgcacggttctgcactatttacccgtggtgaaacacaggcacttgta
gctgctaccttgggtacagagcgtgacgcacagatgattgacgagcttcaaggtaagcgc
gacagccgtttcatgcttcactacaacttccctccatactgtgttggtgaaaccggtatg
attggttcgcctaagcgtcgtgaaattggtcacggtcgtctagccaagcgtggtattcaa
gcagtaatgccaagtgaagaagaattcccgtacgtagtacgtgtggtttctgaaatcaca
gaatctaacggttcatcgtcaatggcgtcggtatgtggtacgtcactagcacttatggat
gcaggtgtacccattaaagcgtcggttgcaggtattgcaatgggcctagttaagagcgac
gacaactttgttgtactttcagatattctgggtgacgaagatcaccttggtgatatggac
tttaaagtagcgggtactacccaaggtattactgcacttcaaatggacattaagattgaa
ggtattaccaaagaaatcatgcaaattgcgcttaaacaagcaaaagaagcacgtttgcac
attcttaacgtaatggacgaagccatgggtggacaccgtgaagagctaagtgaatttgct
cctcgcatctacaccatgaagattgaccaagataagatccgtgacgttattggtaaaggc
ggcgcaatgatccgtcaaattactgaagagtctgacaccaacattgagattgaagacgac
ggtacaatcaagatcttcgcgactgagcgtgcaaaagctgacatcgcaattaacaagatt
gagcaagttaccgctgaaattgaagtgggtaagacttaccacggtaagattacccgtatt
gtcgacttcggtgcgtttgtagaagtactgcctggtaaagaaggccttgttcacatttca
caaatcgcgcacgagcgcgtgaacaaagtaactgactacctggaagaaggccaaatggtt
gacgtgaaggtgatggaaattgaccgtcaaaaccgcgtacgtctaagcattaaagagctt
ctagaaaagcctgcgcctaagtctgacgacgcagagtaa
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