Alteromonas sp. D210916BOD_24: D210916_21290
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Entry
D210916_21290 CDS
T11344
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
altd Alteromonas sp. D210916BOD_24
Pathway
altd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D210916_21290 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altd03400
]
D210916_21290 (uvrB)
DNA repair and recombination proteins [BR:
altd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D210916_21290 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D210916_21290 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
EcpC_N
Kinesin
eIF3_p135
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BFT30953
LinkDB
All DBs
Position
complement(2498958..2500973)
Genome browser
AA seq
671 aa
AA seq
DB search
MSRGFELHSNYKPAGDQPAAIEALVDGLDSGLAGQTLLGVTGSGKTFTMANVIQAVQRPT
LILAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIE
QMRLSATKVLMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQ
YKRNDLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDDEIDKISLFDPLTGAVDKSVIR
ATVFPKTHYVTPREKILNAIEHIKDELADRKKQLLDANKLVEEQRISQRTQFDIEMMMEL
GYCSGIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQVGAMYRGDRSRKET
LVEFGFRLPSALDNRPLKFEEFEQICPQTIYVSATPGDYELNKTHGEIVEQVVRPTGLLD
PIIEVRPVATQVDDVLSEIQKRVELDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDI
DTVERIEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHVNGKAILYADTITKSMKKAMDETERRREKQQAHNKANNITPMRLNKPITDIMDLG
ESAHPASGKVKLRKVEEKRKQQKAASATELMDQITELEKQMFEYARELEFEKAASLRDDI
ESLRKQVVALS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagggtttgagcttcattctaactataagcctgcgggggaccaacccgcagcg
attgaagcattagtagatggattggacagtggactggcaggccaaactctactcggtgtg
acggggtcgggtaagacgtttacgatggccaacgtgatacaggccgtgcaacgacctaca
ttaattttagcccacaacaaaacgttggctgcccagctatatggggaaatgaaagagttc
ttccctaacaacgcggtggagtattttgtatcctattacgactattatcagcctgaggcc
tatgtgcccagtaccgatacgtttatcgagaaagatgcgtctataaatgatcatattgag
caaatgcgactgtcggcgactaaagtgcttatggagcgaagagatgttgtgattgtcgcc
agtgtgtccgccatatatggcctaggggatcctgagtcgtatatgaagatgctattgcat
ctaagacaaggcgataccatggatcagcgtgacattcttcgccgtttggctgaacttcag
tacaagcgcaatgatctcgcttttgaacgtggcacatttagggtgcgcggtgatgttatt
gatatttttcctgctgactccgaaaaacaggcagtaagggtagaactgtttgatgacgaa
atcgataagatcagtctttttgacccccttaccggagcggtggataagtcggtgatccgt
gcaacggtgtttccgaaaactcactatgtgacgccgcgggaaaagattttaaatgccatt
gaacatatcaaagacgaattagccgatcgcaaaaagcaattgctcgacgccaataagcta
gttgaagaacagcgtatttcccaacgtacacagtttgatattgaaatgatgatggagctt
ggctattgctctggcattgaaaattactctcgctatctttccggtcgagcgcctggcgag
ccgccgcccacgttactggactacttccccgctgatggtttgatgttcattgatgaatcg
catgtcacggtgtctcaggtcggtgcgatgtatcgcggtgaccgttcccgtaaagaaacc
ctggtggaatttggttttagattaccgtcggctttggataaccggccgctaaaatttgaa
gaatttgagcaaatctgtccccaaacgatatatgtttctgccacgccaggggattacgaa
ttgaacaagacccacggggaaattgtcgagcaagtggttcgcccaacagggcttttagac
cccattatcgaggtgagacccgtcgccacgcaggttgatgatgtgttatcagaaatccag
aagcgggtagaactggatgaaagagtattaattaccacgttgaccaaacgcatggctgaa
gatttaagtgaatacttaaatgaacacggtgtaaaggtgcgttaccttcactctgatatc
gataccgtcgagcggattgagataattcgcgatttgcgtcttggaaaatttgacgtgttg
gtagggatcaatctacttagagaaggtctcgatatgccggaagtctctttggtagctatt
ttagatgccgataaagaggggttcttacgggctgagcgttcgttgatacagaccatagga
cgagcagcgcgtcacgttaacggcaaggcaattttatatgccgataccataacgaagtcc
atgaaaaaagccatggatgaaaccgagcgaagaagggaaaagcaacaggctcacaacaaa
gcgaataacattaccccaatgcgcttgaacaagcccattacagatattatggatttaggt
gaaagtgctcatccggcctcgggtaaggtgaagctgcgtaaagtagaagagaagagaaaa
caacagaaagcggcaagtgccactgaactcatggatcagattactgaattagaaaagcag
atgttcgaatatgcccgagagttggagtttgaaaaagcggcgtcactgcgggatgacatt
gaatctttgagaaagcaagttgtggcattgtcgtag
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