KEGG   Alteromonas sp. D210916BOD_24: D210916_27010
Entry
D210916_27010     CDS       T11344                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
altd  Alteromonas sp. D210916BOD_24
Pathway
altd03030  DNA replication
altd03430  Mismatch repair
altd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:altd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D210916_27010
   03430 Mismatch repair
    D210916_27010
   03440 Homologous recombination
    D210916_27010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:altd03032]
    D210916_27010
   03400 DNA repair and recombination proteins [BR:altd03400]
    D210916_27010
Enzymes [BR:altd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D210916_27010
DNA replication proteins [BR:altd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D210916_27010
DNA repair and recombination proteins [BR:altd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D210916_27010
SSDB
Motif
Pfam: RNase_T DEDDh_C DNA_pol_A_exo1 DUF5939
Other DBs
NCBI-ProteinID: BFT31525
LinkDB
Position
complement(3197809..3198495)
AA seq 228 aa
MAIGFLQRLLAVLGGSSTLKTKLKAMTFSSTSFCAVDFELTSLDPNSTHITSIGYVSGKR
GRVDLSSCGYHVVNTEAELGQSPVIHGLTLEVLNEGTSLESAIEALQPLLRSSVLVFHNA
SLDLKALDRAFRVLNLPPQEVIYIDTLQLALYQLNKQHQVLPNNSATLTVCRQRLDLPTF
PEHNALDDALATLQLLFAQQEQLGISQNESLSALLHTKSVGIYQLGVN
NT seq 687 nt   +upstreamnt  +downstreamnt
atggcgatagggttcttacaacggctgctggcagtattagggggaagtagtaccctcaaa
acaaaactaaaggcgatgactttttccagtacctctttctgtgcagtggattttgaattg
acctcactcgatcctaattcaacgcatatcacttcgattggttatgtcagtggtaaacgg
ggccgggtggatctctcttcctgtgggtatcacgtggtaaacaccgaagcggaattagga
caaagcccggttattcacgggctgacacttgaagttttaaatgaagggacgtcattggaa
agtgcgattgaagcgttgcagcctctattgcgctcatccgttttagtgtttcacaatgcg
agtctcgaccttaaagcgctggatcgtgcttttcgcgtactcaatttgccccctcaagag
gttatctatatcgatacgcttcaattagcactctatcaattgaataagcaacatcaggtt
ttacctaataatagtgctacgttaacggtatgccgacaacggctcgatctaccgaccttt
cccgaacacaacgcattagacgacgcgttagcaacgctgcaattgctgtttgcacagcaa
gaacagctagggattagtcaaaatgagtcactcagtgcgttgctacataccaaatcagta
ggtatctatcagttaggtgttaattga

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