KEGG   Alteromonas sp. D210916BOD_24: D210916_28230
Entry
D210916_28230     CDS       T11344                                 
Name
(GenBank) peptidase domain-containing ABC transporter
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
altd  Alteromonas sp. D210916BOD_24
Pathway
altd02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:altd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    D210916_28230
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:altd01002]
    D210916_28230
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:altd02000]
    D210916_28230
   02044 Secretion system [BR:altd02044]
    D210916_28230
Peptidases and inhibitors [BR:altd01002]
 Cysteine peptidases
  Family C39
   D210916_28230
Transporters [BR:altd02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    D210916_28230
Secretion system [BR:altd02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   D210916_28230
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_22 RsgA_GTPase AAA_23 AAA_29 AAA_16 AAA_21 nSTAND1 Peptidase_C39_2 AAA_5 NB-ARC nSTAND3 AAA MMR_HSR1 Peptidase_C70 AAA_30 Rad17 Guanylate_cyc_2 AAA_RNF213_3 NACHT
Other DBs
NCBI-ProteinID: BFT31647
LinkDB
Position
3342798..3344975
AA seq 725 aa
MTASSLHHKTGFLRTQRQVPTVLQNEAAECGLACMVMIAQFYGDKRDINTLRQTMSVSLR
GATLKDIIDMASHLGFHSRAVKIEMNDLTQLRCPAVLHWNLNHFVVLVKVKKHAVVINDP
ALGLRTLPLNIVSQHLSGIALEVQPSNEFEPKQVSEQIGLAQFLGGAIGFKRNLITLFTL
SFILQLFALASPYYMQTVIDDVLIYNNLPLLQALAIGFAFLLIIECFTNVFRKLLILSVS
TRLQLQLSASVFKHLIALPIDYFAKRHIGDVVSRFGSVKSIREFLTTGVVTALLDGVMAI
TTLLVMGIYSIKLTLVVLAVIAVYLCMRLVILPWTKRLTAEKISLAALEQSHFMESVRAI
LPVRVYHQEGKRQSDWQNKLVETLNKDIELGKLNIGSATASQLLFGVENLIVIYIGATLV
MSNTLTIGMLLAFLAYKTRFVSAIDSVVSQLIELKMLAVHFSRLSDILLTRPIAQTDALI
PALPKLSPQENTGEQVALQASNIGYRYSAQGNFVFNDLNLTVKKGDIVAIVGESGCGKST
LIKCLMGLYPLTTGTVKCNGKNAASSLVKIASVLQEDVCFSGTIAQNICCFEDCPKLENI
ICAAQLACIHSDIIAMPMQYQSLVGDMGSSLSGGQQQRLLLARALYQKPEILFLDEASSH
LDMANEAQINAHLQTLNMTRIIVAHRPQSVAIANKVYRLVDGKLLQQSASKFRGAPLNKP
SGDIL
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgacagcttcctcactccatcataaaaccggcttcttgcgtactcagcgacaagttccc
acagtactccaaaatgaagctgcagaatgtggtttagcctgcatggtaatgattgctcaa
ttctatggtgacaagcgggacattaacactttgagacaaacaatgtccgtttcacttagg
ggggcaacgctgaaagacattatagatatggccagccatcttgggtttcatagtcgtgca
gtcaagattgagatgaacgacctaacacaattgcgctgtcctgctgtacttcactggaac
ttgaaccactttgtggtactggtaaaagtaaaaaagcacgctgtggttatcaacgatcct
gcccttggcctcagaaccctgcccttgaacattgtttcacagcacctgtcaggtatcgca
ctggaagttcaacccagcaatgaattcgaacccaagcaagtctctgagcaaataggttta
gcacagtttttaggtggtgctattggctttaaacgcaaccttattacgttatttactctc
tcctttattttgcaattgtttgcgcttgcgtctccttactatatgcaaaccgtcatcgat
gacgtgcttatttacaataacctaccgctgctacaagcccttgccataggtttcgcgttt
ttacttattattgaatgcttcaccaatgtatttcgcaaacttcttatcctgtctgtgtcc
acccgactccagctccaactttccgcgtcggtattcaaacaccttattgcacttcccatt
gactattttgccaagcgacatattggtgacgtggtatcgcgttttggctcagtaaaaagt
atcagagaattccttactacgggtgtagtgactgcactgctggatggagtgatggcaata
acgactcttctagtaatgggtatttactcaattaaactgaccttagtggtgcttgccgtc
attgcagtgtatttgtgcatgcggttggtaattttaccttggaccaaacgactcaccgct
gaaaagataagcttagcagcgttggaacaaagccactttatggaaagcgtgagggcgatt
ttaccagttcgggtttaccaccaagaaggcaaacgacaaagcgactggcaaaataagttg
gtggaaacccttaacaaagatattgagttaggcaaattaaatattggcagtgctacagcc
agtcaattgttatttggcgtagagaacttaatcgtcatatatatcggcgccacactggta
atgagcaataccttgaccataggtatgttattagcctttcttgcttacaaaacccgcttt
gtaagtgctatcgacagcgtagtgagtcaactgatcgaattaaaaatgctcgcggttcac
ttcagtcgtctcagcgatatattactcacccgtcctatcgcgcaaacagatgccttaatc
cctgcattacccaaactttcaccacaagagaatacgggcgagcaggttgcgctacaagca
agtaatatcggttatcgctacagcgcacagggcaattttgtttttaacgacctcaatctc
acggtgaaaaaaggcgatatcgtggccatagtcggcgaaagtggttgcggtaaaagtaca
ctaattaaatgccttatgggactctaccccttaaccacaggcactgttaaatgtaatggg
aaaaacgcagcgtcttcgctggtgaaaatagcaagtgtgctacaagaagacgtgtgtttt
agcggcaccatagcgcagaacatttgctgctttgaagactgtccaaagttagagaacatt
atctgtgcggctcaactcgcctgcatccactccgacattatagctatgcctatgcaatat
caatcgttggttggtgatatgggaagtagtcttagtggtggccaacaacagcgtttatta
ctcgctagagcattgtaccaaaaacccgaaattctatttcttgatgaagcaagtagtcac
cttgacatggcaaatgaagcgcagatcaatgcgcatttgcagacgcttaatatgactcga
attatcgttgctcatcgccctcaatccgttgccatagccaataaagtgtaccgcttagtc
gatgggaaattacttcagcagtctgcctcaaaatttcgaggcgccccgttaaacaaacca
tctggagatatactatga

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