Alteromonas sp. D210916BOD_24: D210916_32860
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Entry
D210916_32860 CDS
T11344
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
altd Alteromonas sp. D210916BOD_24
Pathway
altd03030
DNA replication
altd03410
Base excision repair
altd03420
Nucleotide excision repair
altd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D210916_32860 (polA)
03410 Base excision repair
D210916_32860 (polA)
03420 Nucleotide excision repair
D210916_32860 (polA)
03440 Homologous recombination
D210916_32860 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altd03032
]
D210916_32860 (polA)
03400 DNA repair and recombination proteins [BR:
altd03400
]
D210916_32860 (polA)
Enzymes [BR:
altd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D210916_32860 (polA)
DNA replication proteins [BR:
altd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D210916_32860 (polA)
DNA repair and recombination proteins [BR:
altd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D210916_32860 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D210916_32860 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BFT32110
LinkDB
All DBs
Position
complement(3861223..3863889)
Genome browser
AA seq
888 aa
AA seq
DB search
MLKSLIKQYHPTHMAVIFDAKGKTFRDDIYKEYKAHRPPMPEELRSQIEPLHTIIKAMGL
PVIVEPGVEADDVIGTLARHATERGIETLISTGDKDMAQLVNKHVTLINTMTNQIMDVEG
VNTKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDAIYQNLDKIADL
SFRGSKSMATKMQEFEEQARLSYTLATISIDLELDYDVETLTPSQADNEQLRDLFAEYEF
KRWHTEVSALLSGDISTSSPSTDSGNNDTSSSNTEGQSSTPQSIDKSQYETVLDDKRFKE
WIALLEAAELFAFDTETTSLNYMEAELVGVSFCIEPGKAAYVPVAHDYPDAPTQLAREDV
LAALKPILESQDIIKVGQHIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSL
ALAYLGHKTIHFEEIAGKGAKQLTFNQISLDEAGPYAAEDADITLRLHQVIWEKLKDIPE
LNRLLIDVEVPLACVLSRMEQEGVLIDSQKLRQQSQDLATRIAELEKDVHEEAGEPFNLG
STKQLQHILFDKMSLPVIKKTPKGAPSTSEDVLQELALEYSLPQKIMEYRGLTKLKNTYT
DKLPKMINHRTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRVRQAFIPREGNKI
VAADYSQIELRIMAHLSGDKGLLDAFAHGKDIHKATAAEVFGVALEEVTTEQRRSAKAIN
FGLIYGMSAFGLSKQLNIPRNEAQKYMDLYFERYPGVLAYMDTTREGAKEKGYVETVFGR
RLYLPDIKASNGARRKGAERAAINAPMQGTAADIIKMAMIKVDEWIAKYASEDVTMMMQV
HDELVFEIKADKVTEHVATITSLMENAATLNVPLVVEAGVGDNWDEAH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaagtttgatcaagcagtatcaccctacccatatggctgttatttttgacgcg
aaaggtaaaactttccgcgatgatatttacaaagaatacaaagcccatcgcccccctatg
ccagaagagcttagaagtcagatcgagcctcttcacaccatcatcaaagcaatggggctt
ccagtcatcgtagagccgggtgtagaagctgacgatgttattggcacgctagccagacat
gctacagaaagaggcatcgagacgttaattagcacaggtgacaaagacatggctcagctt
gtcaataaacatgtcacgctaattaatacaatgaccaatcagatcatggacgtagaaggt
gtaaatactaaatttgggatcccaccagaacttgtcatcgatttccttgcacttaaaggc
gacaaagtcgacaacattccaggtgtaccaggtgtaggtgataaaagcgcccaagcacta
ctaaatggcattggtgggattgatgccatttatcagaacttagataaaatcgctgatttg
tcgtttaggggcagcaaatcaatggcgactaaaatgcaagaatttgaagagcaagcgcgg
ctgtcttatacgctggcgacaatcagtattgatctagaattagattatgatgtggaaacg
ctaacgccttcacaagccgataacgaacaacttcgcgatctgtttgcagaatatgaattt
aaacgctggcatacagaagtcagcgcattgctttcaggtgatataagcacttcttcgccc
tccactgacagtggaaataacgatacctcctcttcaaatactgaaggccaatcgtcaaca
ccacaatctattgacaaatctcagtatgaaaccgtacttgatgataagcgttttaaagag
tggattgcactacttgaagccgcagagctttttgcatttgatactgaaactaccagttta
aattatatggaagcggaacttgttggtgtgtctttttgcattgaaccaggaaaggccgct
tatgttcctgttgctcacgattatcccgacgctcccacacaacttgctcgggaggacgta
ctggcagccctaaaacctatcttggagtcacaggatataattaaagtaggtcaacacatt
aagtacgacaagaatgtattggccaattacgatattacgctcaacggtatcggctttgac
actatgctagaaagctatgtgttaaacagtacagctcaacgccatgatatggactcactc
gcccttgcctatctggggcataaaactatccattttgaagaaattgcagggaaaggcgct
aagcagctcactttcaatcaaatttctttagacgaagcgggcccttacgcagcagaagat
gcggatattacgttgcgactccatcaggttatttgggaaaagttgaaggatattcccgag
ctcaaccgtctacttatcgatgtcgaagtccccctcgcctgtgtattgtcaagaatggaa
caggaaggtgtacttatcgacagccaaaagcttcgtcagcaaagtcaggatctggccacg
cgtattgcagagttggaaaaggatgtacacgaagaagctggtgagccctttaatcttggg
tcgaccaagcaacttcagcatattctattcgacaaaatgtcgttgcccgtgatcaaaaag
actcccaaaggcgcaccttcaacgtcagaagatgtgcttcaagagcttgccttagaatat
tcgctaccacaaaagatcatggaatatcgcgggttaacaaaactcaagaatacctacact
gacaaattacccaagatgatcaatcatcgtacaggacgagtccacacgtcatatcaccaa
gcagtgaccgcgacgggaaggttgtcctctaccgatccaaatttgcaaaacattcccatt
agaaacgaggaaggtcgtcgagtacgacaagcgtttatcccaagagagggtaacaagatt
gttgccgccgactactcacagatcgaattgcgaataatggctcatctttccggagacaag
ggtttgctggacgctttcgctcacggtaaagatatccataaagccaccgctgccgaagta
tttggtgttgcacttgaagaggtaacaacagaacaacgccgcagtgcaaaagctattaat
ttcggacttatctacggtatgagcgcctttgggctttctaaacagctcaatattcctcga
aatgaagcacaaaagtacatggacctctactttgaacgctatccaggggtgctagcatat
atggataccacccgtgaaggtgcaaaggaaaaaggatatgtagaaacggtatttgggcga
cgtttgtatttaccggatatcaaagccagcaatggtgcccgccgcaagggagcagaacgg
gcagcgatcaatgccccaatgcaaggcactgcggcagatatcatcaagatggccatgatc
aaagttgatgagtggattgccaaatacgcgtctgaggacgttaccatgatgatgcaggta
cacgatgaactggtatttgaaataaaagcagacaaagtgactgagcacgtggctaccatt
acttccctcatggaaaatgcagcaacactgaatgtgccattagtggtagaagctggcgtg
ggagacaattgggacgaagcgcactaa
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