Alteromonas sp. 76-1: ALT761_00063
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Entry
ALT761_00063 CDS
T10165
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
alte Alteromonas sp. 76-1
Pathway
alte03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALT761_00063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alte03400
]
ALT761_00063
Enzymes [BR:
alte01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ALT761_00063
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ALT761_00063
DNA repair and recombination proteins [BR:
alte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ALT761_00063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
VEL95114
UniProt:
A0A3S5B353
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All DBs
Position
cAlt76:73575..74384
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AA seq
269 aa
AA seq
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MPELPEVEVSRLGVSPYLLNETIDNIIVRERRMRWPVPEDVALAIGQKVIAVKRRAKYLM
IETEAGTLILHLGMSGKLRVIDASTPVAKHDHVDIVMATGKCLRFNDPRRFGAFLWQPPG
AALKLLANLGPEPLTDDFDDTRLFTLSRGKKSTVKNFIMDNAVVVGVGNIYANEALFLAG
IDPRREAGKVSSTRYKNLTQIIKQVLAKAIEQGGTTLKDFAQTDGNPGYFAQHLNVYGRK
GEPCEVCKTQIQSKVIGQRNTFFCKQCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagttgaagtaagccgtttaggcgtttccccctatctgttaaac
gaaacgatagataatattattgtacgcgaacgtagaatgcgttggcctgttcccgaggat
gtggcgttagctatcggtcaaaaggtgatagccgtcaagcgtagagcaaagtatcttatg
atcgaaaccgaagcgggcacgcttattttgcatttaggtatgtcgggtaagttgcgagtt
attgatgcgtctacacctgttgcgaaacacgatcatgtggatatcgtgatggctacgggg
aaatgcttacgttttaacgaccctaggcgttttggggccttcttatggcaaccaccaggg
gcagcattgaaattacttgctaaccttgggccagagccattaactgacgatttcgatgat
acgcgtttgttcacgctctctagaggcaaaaaaagtacagtaaaaaacttcatcatggat
aatgctgttgtggtgggcgtagggaatatttatgccaacgaagctttatttttagcgggt
atcgacccaagaagagaggcggggaaagtcagcagcacccgctataaaaaccttacgcaa
atcatcaagcaggttttagcaaaagcgatagaacaaggcggcactacattaaaagatttt
gcgcaaaccgatggtaacccaggctattttgcacagcatttaaatgtgtatggaagaaaa
ggggagccgtgtgaggtatgcaaaacgcaaatacaaagtaaagtgattggccagcgaaat
acattcttttgtaaacagtgtcagcgctag
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