Alteromonas sp. 76-1: ALT761_00216
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Entry
ALT761_00216 CDS
T10165
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alte Alteromonas sp. 76-1
Pathway
alte03420
Nucleotide excision repair
alte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ALT761_00216
03430 Mismatch repair
ALT761_00216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alte03400
]
ALT761_00216
Enzymes [BR:
alte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALT761_00216
DNA repair and recombination proteins [BR:
alte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ALT761_00216
MMR (mismatch excision repair)
Other MMR factors
ALT761_00216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
VEL95265
UniProt:
A0A3S5AT74
LinkDB
All DBs
Position
cAlt76:complement(266439..268610)
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AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALILAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRGLNNMWIGTFHGLAHRLLRAHHAEANLPENFQILDSDDQY
RLIKRILKAMNLDEKHWVPRQIQWYINGNKDEGLRPQHIETHNDQTQQKMREIYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLANYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGN
QNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNNPTTIRLEQNYRSTGTILKAANTVIDN
NTGRLGKELWTDGNDGEPISVYAGFNELDEARFIVSKIKDWLNQGNALKDTAILYRNNAQ
SRVLEEALLHQGTPYRIYGGLRFFERQEIKDALGYLRMMNHPHDDAAFERVVNTPTRGMG
EKTLSQVREAARTHNCSMWQASQLLINENALKGRALNALQSFVLLVTELEQATVDEPLEK
HADVAIRQSGLYAMYQAERGEKAQARLENLEELVTACKQFTVPDEAEEMTPLSAFLAHAS
LEAGETQAGTDQDAVQMMTIHTAKGLEFPMVFMAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMEKLYITYAESRRLYGQDKYHTASRFIREIPADCVEEVRLKSTISRPIHNRFS
QATSHASFEETGFQLGQKVVHRKFGEGIVLNYEGSGEHARVQVNFDEFGTKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcccgactgcttgacgagcttaacgacaaacaacgtgaagcggtagcagcc
cctctttctaacgccctcatattagctggcgcgggaagcggtaaaactcgggttttggtg
catcgcatagcatggttaatggaagtggaaaatattgcccctttttctattttagccgta
acctttactaacaaagccgcgaaagaaatgcgtggccgaatagaatcattaatgggtcgt
ggtctgaataatatgtggattggtactttccacggattagcccacaggctgcttcgcgct
caccatgcagaagctaatttgcctgaaaacttccaaattcttgactcagacgaccaatac
cgtttgattaaacgtattttaaaagccatgaatttagacgaaaagcactgggtgcctcgt
caaattcagtggtacatcaatggtaataaagacgaaggcctacgccctcaacatattgaa
acccacaacgaccaaacccagcaaaaaatgcgtgagatttatgccgcgtatcaagacgcg
tgcgaccgctcagggcttgtggattttgccgagttattgttgcgtgcacatgagctttgg
gctaaaaaccctgaagtgctcgccaactaccaacgacgtttccgcgccgtattagttgac
gaattccaagacaccaacaacattcaatacgcatggctacgcatgctgtgtagcggcaat
caaaacaacattatgattgtgggcgatgacgaccaatctatatacggctggcgcggcgcg
aatgttgataatattcagcacttcttgaaagacttcaataaccccacaaccattcgatta
gaacaaaactaccgttctaccggcaccattttgaaagctgccaacacggttattgataat
aatacgggccgattaggcaaagagctttggacagacggcaacgatggcgagcccatctct
gtttatgcggggtttaatgagttagatgaagcccgctttattgtgtcgaaaattaaagac
tggctgaaccaaggtaatgcgttaaaagacactgccattttatatcgcaataacgcccag
tcgcgggtattagaagaagccttactgcaccaaggtacaccgtatcgcatttatggcggc
cttcgattcttcgaacgccaagaaattaaagatgcacttggctatcttcgcatgatgaat
caccctcatgacgatgccgcctttgaacgtgtggtgaacacgcctactcgcggtatgggt
gaaaaaaccctctcacaggtacgagaagccgcaagaacacataactgctcaatgtggcag
gctagccaactactcattaacgaaaacgcgctaaaaggccgtgcacttaatgcccttcaa
agttttgtgctgttagttaccgagcttgagcaagctaccgtagatgagcctttagaaaaa
cacgctgatgtggccattaggcaatcaggcttatatgccatgtatcaggccgaacgtggc
gaaaaagcccaagcgcgactagaaaacttagaagaattggttaccgcgtgtaagcaattt
accgtacctgatgaagcagaagaaatgacgccactttctgccttccttgctcatgcctcg
ttagaagcgggcgaaacccaagcaggtacagaccaagatgccgtgcagatgatgactatt
cacactgctaaagggctcgaattccctatggtatttatggccggtgttgaagaaggcatg
tttccaagccagatgaccaatgatgaaccaggcagaatggaagaagaacgccgcctgtgt
tacgtgggcatgactcgcgccatggaaaagctatatattacttacgcggaaagccgtcgt
ttatacgggcaagacaaataccacacggcatctcgctttattcgtgaaattccagctgac
tgtgttgaagaagtaaggctcaagtctacgatttctcgaccgatacataaccgattcagc
caagcaacttcacacgcctcatttgaagaaaccggctttcagttgggccaaaaagttgtt
caccgtaaatttggtgaagggatagtactaaactacgaaggcagtggtgaacacgctagg
gtacaagttaattttgacgaatttggtacaaaatggctcgttctcgcctatgctaaattg
gaaaaagcatag
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