Alteromonas sp. 76-1: ALT761_01043
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Entry
ALT761_01043 CDS
T10165
Name
(GenBank) Fis family sigma54 specific transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
alte Alteromonas sp. 76-1
Pathway
alte02020
Two-component system
alte02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ALT761_01043
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ALT761_01043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alte03000
]
ALT761_01043
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
alte02035
]
ALT761_01043
Transcription factors [BR:
alte03000
]
Prokaryotic type
Helix-turn-helix
Other families
ALT761_01043
Bacterial motility proteins [BR:
alte02035
]
Flagellar system
Flagellar assembly proteins
Others
ALT761_01043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
AAA
AAA_7
bpMoxR
AAA_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
VEL96082
UniProt:
A0A3S5FHM7
LinkDB
All DBs
Position
cAlt76:1220906..1222357
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AA seq
483 aa
AA seq
DB search
MKDILLVSDSQELIHSLETIVTFLGESCQSRGLSDCESYLKEKGADAVLIEYASPSVVNS
LVARFPHIPFVAILHSNGEVAASCNLVSVITLPLTYPVLTQSIHRCQEYSRRKPGKTRAG
GSKTRLFRSLVGKSDEIQIVRRLVEQVAPTEATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERIYERVGGSKPQQCNVRIIAATHRHLETMIKEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVDSVRFTERAIESLMEHNWAGNVRELSNLVERLSILY
PGQIVDVADLPEKYQYGEIQAYEPDYPEELLERDAFNALFAESASQDPYDEPEEESGLPV
SSSLPEEGVNLKEYLSELEITLIRQALEQQEWVVARAADKLGMRRTTLVEKMRKYDIQRM
EEV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatattttgctggttagtgatagccaggaactaattcatagcttagaaaccata
gtcacctttttgggagagtcgtgtcagtcacgagggctttctgactgtgaaagttacctg
aaagaaaagggcgcagatgcggtacttattgagtacgcgtcaccgtcagtggtgaattca
ctggttgctcgttttccacacataccattcgttgccattttacattcaaatggcgaagtg
gccgcgtcgtgcaatttagtcagcgtgatcaccttaccgcttacttacccagtacttacg
caatcaattcaccgatgccaagaatacagccgcagaaagccgggtaagacccgcgctggt
gggtctaaaactcgcctgtttagaagtttggttggtaaaagcgacgaaattcagattgtg
cgtaggttggtagagcaagtggctccaacagaggcaacagtgctaattttgggggagtct
ggtacaggtaaggaagtggtggcacgtaatgtacatttcttgtcagaacgtaaagatggc
ccctttattcctgttaactgcggtgctattcccggcgagcttcttgaaagtgaattgttt
ggtcacgaaaaaggcgcgtttactggagctataagtgctcgaaaaggccgttttgaatta
gccgagggtggaacattatttctagatgaaattggcgacatgccgttgcagatgcaagtc
aaactgctgcgggtactgcaagagcgtatttacgagcgagtaggtggtagcaagccccaa
caatgcaatgttcgtattattgcggctacccatcgtcatctagaaactatgatcaaagaa
gataagtttcgtgaagatctctactaccgcttaaatgtgttccctattgatagccctgca
ttacgtcaacgcaaagacgacatcccgttactgctgcaagaactcaacagccgtattcaa
ggggatggtgtagatagtgtgaggttcactgaacgcgcaatagaatcgttaatggaacat
aattgggcgggtaatgttcgtgaactctcaaatttagttgagcgcctgagtatactttat
cccggtcaaatcgttgatgtggccgaccttccagagaaataccagtacggtgaaattcaa
gcgtacgaaccagattaccccgaagagttgctagagcgagacgcgtttaatgcgcttttc
gcagaatcagcttcgcaagacccgtacgatgaaccagaagaagagtctggcttgccggtt
tcttcctcacttcctgaagaaggggttaatctaaaagagtatctttctgagcttgagatc
accctcattcgccaagcattagaacaacaagagtgggtcgttgctcgcgctgcagataag
ctcggaatgcgtagaactacccttgttgagaaaatgcgtaagtacgatattcagcgtatg
gaagaagtttaa
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