Alteromonas sp. 76-1: ALT761_01045
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Entry
ALT761_01045 CDS
T10165
Name
(GenBank) two component Fis family sigma54 specific transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
alte Alteromonas sp. 76-1
Pathway
alte02020
Two-component system
alte02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ALT761_01045
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ALT761_01045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
alte02022
]
ALT761_01045
02035 Bacterial motility proteins [BR:
alte02035
]
ALT761_01045
Two-component system [BR:
alte02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
ALT761_01045
Bacterial motility proteins [BR:
alte02035
]
Flagellar system
Flagellar assembly proteins
Others
ALT761_01045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
HTH_24
MerR
Mg_chelatase
AAA_16
Sigma70_r4_2
HTH_28
HTH_23
DUF2089
AAA_19
HTH_20
AAA_3
HTH_Crp_2
HTH_10
HTH_11
AAA_7
Motif
Other DBs
NCBI-ProteinID:
VEL96084
UniProt:
A0A3S5B4M0
LinkDB
All DBs
Position
cAlt76:1223672..1225012
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AA seq
446 aa
AA seq
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MSKTTILIVEDDAGLREALYDTLLLGDYDVVDADCAEAALMVLAGRKIDLVVSDIQMGEM
SGLTLLKSIKAKYPQLPVLLMTAYATIDDAVQAMRDGATDYLSKPFAPEVLLNLVGRYAP
AQKVESCTPIVADPSSLKLLELSRKVAKSEATVMVLGPSGSGKEVLSRYIHDQSTRADAP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTLLLDEITEMDLALQAK
LLRVIQEREVERLGGRKTIKLDVRVIATSNRDLRKAVELGNFREDLYYRLNVFPITWRPL
AERPGDIVPLAEHLINRHTSVQGLGNVRLSAAARNKLAQYTWPGNVRELENVIQRALILC
DDGSIESGDLMIDMAVHDEMAVKQDEPEDNSRLGSELRQQEHQIILDTLTLCNGKRKDVA
EKLGISPRTLRYKLARMREDGIELPA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaacaactattcttatcgtggaagacgatgctgggttacgcgaagcgttgtac
gacaccttattactaggcgattacgatgttgtagatgccgactgtgccgaggctgcatta
atggtattagcgggtcgaaagatagatcttgtggtgagtgatattcaaatgggtgagatg
agcggccttactttgttgaaaagcattaaggctaaatacccacaactgcctgtcttgtta
atgacagcgtatgccaccattgatgatgccgtgcaggccatgcgagatggtgctactgat
tatctgtctaagccattcgcccctgaagtgctacttaatcttgttgggcgctatgcacct
gctcaaaaagtagaatcttgcacgcctattgtggctgacccttctagtttaaaactactc
gaattatcaagaaaagtggcgaagtcagaagcgaccgtgatggtgcttgggccaagtggt
tcaggtaaggaagtactttctcgctatatacacgatcagtctactcgcgccgatgcgcct
tttgtggcaattaactgcgccgctattcctgaaaacatgcttgaggctaccttgttcggg
tatgaaaaaggcgcgtttaccggcgctattcaggcctgtccgggtaagtttgaacaagcc
caaggcggaacactgctattagatgaaattaccgaaatggatttagcgcttcaggcgaaa
ctacttcgtgttattcaagagcgtgaagtagagcgactcggtgggcgcaaaacgattaaa
ctagatgtacgggttattgccaccagtaaccgcgatttacgtaaagcggtagaactagga
aacttccgagaagatttgtattaccgcttaaatgtttttcctatcacatggcggccactt
gctgagcgtccaggtgatattgtaccgctagctgaacatctgattaatcgtcacactagc
gtacaaggcttaggcaatgttcgtctcagtgccgcggcacgaaataaattggcgcaatat
acttggccaggtaacgtgcgagagcttgaaaatgttattcagcgggctcttatactgtgt
gatgatggcagtatagagtctggtgacttaatgattgatatggcggtgcatgacgagatg
gcagtaaagcaggacgagccagaagataatagtcgtttaggctcagagcttcgccagcaa
gaacatcaaatcatccttgatacacttaccctgtgtaacggtaagcgtaaagatgtggca
gaaaaacttggtatcagccctcgaaccttacgttataagttagctagaatgcgtgaagat
gggattgaattacccgcttaa
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