KEGG   Alteromonas sp. 76-1: ALT761_01064
Entry
ALT761_01064      CDS       T10165                                 
Name
(GenBank) RNA polymerase sigma-28 (SigD/FliA/WhiG) subunit
  KO
K02405  RNA polymerase sigma factor FliA
Organism
alte  Alteromonas sp. 76-1
Pathway
alte02020  Two-component system
alte02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:alte00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ALT761_01064
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ALT761_01064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alte03021]
    ALT761_01064
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:alte02035]
    ALT761_01064
Transcription machinery [BR:alte03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ALT761_01064
Bacterial motility proteins [BR:alte02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ALT761_01064
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE CT_C_D HTH_38
Other DBs
NCBI-ProteinID: VEL96103
LinkDB
Position
cAlt76:1243939..1244670
AA seq 243 aa
MNSKAAAYQQQTDKSQLVERHASLVKRIAHHLMARLPASVLVDDLIQSGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNGRAITEAISQVEGETGRDARDVD
IAAKMNVSMQDYHQMLNEVNAGKLVGIEDLGVSEDVISTEKNRGSDAPLEDLMQGAFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKSRMKSWQV
DEE
NT seq 732 nt   +upstreamnt  +downstreamnt
ttgaatagcaaagcagccgcttatcaacagcaaacagacaagtcacaattagttgagcgt
cacgcttcgctggtgaagcggatagcacaccacttaatggcgagactgccagccagtgtt
cttgtcgatgatttaatccagtcaggtatgattggactgctagaagctgcacgaaatttt
gacggttccaaaggtgcaagttttgaaacctttgcaggtattcgtattcgtggcgctatg
cttgatgaaataagaaaaggtgattggactcctcgttccgttcataaaaacggaagggca
atcacagaagccatctctcaagttgaaggtgaaacaggccgagacgcgcgagatgtagat
attgcggctaaaatgaatgtcagcatgcaagattatcatcaaatgctgaacgaagtgaat
gccgggaaattggtggggattgaagaccttggggtttctgaagatgtcatttctacagaa
aagaaccgaggcagcgacgcaccgttagaagatttgatgcaaggggctttccaaaaagcg
ctagcacatgctattactacattacccgaacgggaagcgattgtactttctttatactat
gatgaagaactgaatcttagagaaataggcgaagttcttgatgttagtgaatcgcgagta
agtcaaattcatagtcaggccatgttaaaactcaaatcacgaatgaaatcgtggcaagtt
gacgaagaatag

DBGET integrated database retrieval system