Alteromonas sp. 76-1: ALT761_01142
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Entry
ALT761_01142 CDS
T10165
Name
(GenBank) PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)-like protein
Organism
alte Alteromonas sp. 76-1
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
dCache_1
PAS_8
HAMP
PAS_13
Motif
Other DBs
NCBI-ProteinID:
VEL96175
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Position
cAlt76:complement(1325263..1328451)
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AA seq
1062 aa
AA seq
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MAYLFQSLQSRIILLIVMVALPGLVGVFYDSYVERERAVEAAISQSVNTAKATSKFQSAL
LDKTRTFLQNLASFDAVKNQNPQACSAFLADVLKVNSNYINLGAPRADGELLCNARPIKT
SVNVYDRPYIQEALTTRGFSIGEFQIDRVTNLTSVNFAYPVLNATSDTVVALVVAVISLE
WWSEALSESHLPDNTVAYITDSENKIVAAYPTNNNLLGTPLDTFSAQIDSSNTAIDTNAF
VSNDPYQRVYVKRPLFEDGKQINITVGIPLKQTLEAINERLIKTAGILAAIVMLLVGVSV
WGVRRNVLKPIRTLLQSTKALAEGKEVSDAPLHGSVELVKLQQRFTSMAKTRLEAEKQLL
DSQASLLESKNILASHIENTPLGCITWDPQLICTDWNKSAEFIFGYKKEEAIGKHASDLI
IPLERQKEINEAFAQLLKKKAPKRKINKNVTKLGHPIICEWYSTPIFDLAGNVISVTSLV
QDITKNKHLEEKLKLSASVFSHAREGIFITDSNANIIDVNKTFVDITGYERNEVLGKKPN
MFKSGKQSPEFYHHLWASILNKGYWAGEIWNKRKNHEVYAQLLTVSAVNDDEGNVKNYIA
IFSDISEAKEQQYKLEHMAHYDVLTNLPNRSLLAERLDRALSQCKSDKGFVAVALLDLDG
FKEINDNFGHSVGDELLVILAHRLKGTLRETDTISRFGGDEFVTVLANLKQPQDFVAIIK
NMLRVASEPVKIGESQLKVSASIGVTLYPADNTDADQLIRHADQAMYLAKQKGKNCYHLF
DIESEDAIKARHEILQSITTALHNREFVLYYQPKVNMRTGEIIGAEALIRWKHPVEGILS
PAAFLPFIENHQLSIDIGEWVIEESLQQFSRWKKLGVHIPISVNISALQIQQRNFPIRLA
RLLSKVPNVPPEAFQLEVLETSKLGDIKKVAEIMDDCVKLGVTFAIDDFGTGYSSLTYLR
RLPAKVIKVDQTFVRDMLIDPEDRTIVVGVIALAKSFNRSVIAEGVETIAHGTSLLNLGC
ELAQGYGIARPMPATDMPDWIAHWSTKTEWKSPTPQLLDNEA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacctttttcagtcactgcagtcgagaataattctcctcatcgttatggttgca
ttaccagggttggttggtgttttttacgactcatacgttgaaagagagcgcgctgtagaa
gctgccataagccaatcggttaataccgccaaagccacctcaaaattccaatctgcactg
cttgataaaacacgtacttttcttcaaaaccttgccagtttcgatgcggttaaaaatcaa
aacccccaagcatgcagtgcttttcttgccgatgtactcaaggtaaatagtaactatatt
aatctgggtgcaccgagggcagatggcgaactactgtgtaatgcacgtcctataaaaaca
tcggtgaacgtctacgatcgcccttatattcaagaagcgctgactacacgaggtttttct
atcggtgagtttcaaatagaccgagtaactaatcttactagtgtgaactttgcctatccg
gtattgaacgccacaagcgacactgtggtggcgttggtggtagcggttatttcattagaa
tggtggagtgaagcgctctctgagtcccatttaccggataataccgtggcttacattacc
gatagcgagaataaaattgttgccgcatatccaacgaacaataacctcttagggactcca
ctggacaccttcagcgctcaaatagatagttccaatactgcaattgataccaatgccttt
gttagcaatgacccctatcaacgggtatatgtaaaacgcccattatttgaagatggcaag
caaatcaatatcacggtgggcattccgcttaagcaaacccttgaagccattaatgagcga
ttgattaaaacggcgggaattttggccgcgatagttatgctacttgtaggagtttcagta
tggggcgtgcgaagaaacgtactaaagccaatacgcactttacttcaatctactaaagcc
cttgctgagggcaaagaggtgagcgacgcgccactgcatggaagtgttgagttggttaaa
ttacagcaacgtttcacttcgatggcaaaaacacggctagaggcagaaaagcaacttctc
gacagtcaggcttctttgctagaaagcaaaaatatattagcaagtcatattgaaaatacg
cctttagggtgcattacttgggatcctcagcttatctgtaccgattggaataaatcggca
gaattcattttcggctataaaaaagaagaagcgattggaaaacatgcctcagatctcatt
atccctctagaacgtcaaaaagagataaacgaggcattcgctcagctacttaagaaaaag
gccccaaagcgaaaaataaataaaaacgttaccaaactaggtcaccccataatctgcgaa
tggtatagcacccctatttttgacctagctggtaacgtgataagcgtaacttcgttagtt
caggacataactaagaacaagcatctagaagaaaaactaaaactatcagcaagtgtgttt
tctcacgcaagagaaggcatattcattacagatagcaacgcaaatattatagatgtgaac
aaaaccttcgttgatataacaggctatgagcgaaacgaagtgttaggcaaaaagcccaat
atgtttaagtcaggaaaacaatctccggagttttaccatcacctatgggcatctattctc
aacaaaggttactgggcaggagaaatttggaacaaacgtaaaaatcatgaagtttatgcc
caactattaaccgttagcgcagttaatgatgatgaaggcaatgttaaaaattacatcgca
atatttagcgacatttctgaagccaaagagcagcaatacaaactagagcacatggcacat
tatgatgtattaactaatttacccaaccgctcattgcttgccgagcggctagatagagcc
ctgtctcaatgtaaatctgataaagggtttgtggcagtagcactactcgatttagatggc
tttaaagaaataaatgataacttcggtcatagtgtgggcgacgaacttcttgtgatcttg
gctcatcgtttaaaaggaacattgcgagaaactgacactatttcacgctttgggggtgac
gagtttgtgacggtattggcaaacctaaagcaacctcaagattttgttgccatcattaag
aatatgctaagagttgcatcagaaccggtaaaaattggtgagagccagcttaaagtatct
gccagtatcggggtaacgctttaccctgcagataacactgatgctgaccagcttatccgc
cacgccgaccaagcgatgtatttagcaaaacagaaaggtaaaaattgctatcacttattt
gatatagagtctgaagacgccataaaagctcgtcatgaaatactccagagcataaccaca
gccctacacaacagagagttcgtgctttactatcaaccgaaagtgaatatgcgcaccgga
gaaattattggcgcagaggcccttattcgttggaaacaccccgttgaaggcatactctcc
cctgcagcctttttaccgtttattgaaaatcatcagctcagtatagatattggtgaatgg
gttatcgaagaatcattgcagcaatttagtcgctggaagaaattaggggttcatatcccc
attagtgtgaatatttctgcgttgcagattcagcaaagaaactttcctattcgcttagct
cgtctgttgtctaaagtacccaatgttccccctgaagcgtttcagttagaagtattagaa
accagtaagctaggtgatattaaaaaagtcgcggaaattatggatgattgcgtaaagcta
ggggtcacgttcgccattgatgactttggaacaggttattcctctctcacttacttgagg
cgattgccggcaaaggtcatcaaggtagaccaaacctttgtacgtgatatgttaatcgac
ccagaagatagaactattgtagtgggggttatcgccctagctaaatcgtttaatcgcagt
gttattgctgaaggggtagaaactattgcccatggcacatcgttgctaaatttaggctgc
gagctagcacaagggtacggtatagctcggcctatgcccgccacagacatgcctgattgg
atagcgcactggtccactaaaaccgagtggaaatctcctaccccacagcttctcgacaac
gaggcataa
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