Alteromonas sp. 76-1: ALT761_01617
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Entry
ALT761_01617 CDS
T10165
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alte Alteromonas sp. 76-1
Pathway
alte03030
DNA replication
alte03430
Mismatch repair
alte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALT761_01617
03430 Mismatch repair
ALT761_01617
03440 Homologous recombination
ALT761_01617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alte03032
]
ALT761_01617
03400 DNA repair and recombination proteins [BR:
alte03400
]
ALT761_01617
Enzymes [BR:
alte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALT761_01617
DNA replication proteins [BR:
alte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALT761_01617
DNA repair and recombination proteins [BR:
alte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALT761_01617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
VEL96629
LinkDB
All DBs
Position
cAlt76:1876183..1876899
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AA seq
238 aa
AA seq
DB search
MRQIVLDTETTGIDPKEGHRVIEIGCVELVNRKLTGNHFHVYINPGRQIEQEAIDVHGIT
NEFLTDKPTFRDVAEDFVNFIRGAQLVIHNAPFDVGFMDHEFGMEPKTRGVITKDICSVL
DTLAVARKMHPGQKNNLDALCKRYGIDNSHRELHGALLDAEILADVYLLMTGGQTKLNLA
SKGSGENQSDALRRLNRNGNKLKVIKASADELAQHESRLDIVEKAGGKCLWRPEQNDA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattgtactagatacagaaactacaggtatcgaccctaaagaaggtcaccga
gtgattgaaattgggtgtgttgagctggttaaccgtaaacttactggcaatcactttcat
gtatacattaatccaggccgccaaattgaacaagaagcgatagatgttcacggtattacg
aatgagttcttaaccgacaaacctacatttagagatgtcgctgaagatttcgtgaatttt
attcgcggtgcacagttggttattcataacgcgcccttcgatgtgggctttatggatcac
gaatttgggatggaaccgaaaacccgtggcgttatcaccaaagatatttgtagtgtgctt
gataccttggcggttgcgcgcaaaatgcacccagggcagaaaaataacctagatgcgttg
tgtaagcgttatggcatagataacagccaccgtgagcttcacggggcattactggatgct
gaaatactcgccgacgtttacctgctaatgaccggtgggcagacaaagcttaatttggca
tctaagggcagcggtgaaaaccaatcagatgcacttcgccggttgaacagaaacggaaat
aaattaaaggttatcaaggctagcgccgatgaattagcacagcatgaatcccgtttagat
attgtagaaaaagcagggggtaaatgtttgtggcgcccagagcaaaacgatgcatag
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