Alteromonas sp. 76-1: ALT761_01762
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Entry
ALT761_01762 CDS
T10165
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alte Alteromonas sp. 76-1
Pathway
alte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALT761_01762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alte03019
]
ALT761_01762
03016 Transfer RNA biogenesis [BR:
alte03016
]
ALT761_01762
Enzymes [BR:
alte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ALT761_01762
Messenger RNA biogenesis [BR:
alte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ALT761_01762
Transfer RNA biogenesis [BR:
alte03016
]
Prokaryotic type
tRNA degradation factors
ALT761_01762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
LppA
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
VEL96769
LinkDB
All DBs
Position
cAlt76:2040062..2042173
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AA seq
703 aa
AA seq
DB search
MTPITKSFQYGQHTVTLETGVIARQATAAVMASMDDTAVLVTVVGKKEAKADQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFKNEVQVVITVMSAN
PDIPTDIISMIGTSAALAISGIPFNGPIGAARVGYTDGEYILNTRVEEQADSDLDLVVAG
TEGAVLMVESEADVLSEDVMLGAVMFGHEQLQTVVTAVKEFAANVSIDKWDWKPEAENTT
LKDKVKALAEAEMVAAYQISDKLARKDAVTAATEKARDAILAEDETQDKKEVSNLLHDLE
SDVVRSRILAGEPRIDGRDPKMIRALDVATGILPRTHGSAVFTRGETQAIVAATLGTERD
AQMIDELQGRRDSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSEEEF
PYVVRIVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDENFVVLSDI
LGDEDHLGDMDFKVAGTTGGITALQMDIKIEGITKEIMQIALKQAKEARLHILNVMDEAI
GGHREELSEFAPRIYTVKIDQDKIRDVIGKGGAMIRSITEESDTNIEIEDDGTIKIFATE
RAKADIAISKIEQVTAEIEVGKTYHGKITRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLTEGAMIDVKVMEIDRQNRVRLSIKELLEKPAPKSDDAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaatcatttcagtatggacagcatactgtaacactagaaacgggc
gttatcgctcgtcaggccacagcagccgtcatggcaagtatggatgacaccgctgtatta
gttactgttgtaggtaagaaagaagcgaaagcagatcaagatttcttcccactaacagta
aactatcaagaaaaaacatatgctgcgggtaaaatccctggtggtttcttcaaacgtgaa
ggtcgtccttctgaaggcgaaacccttacagcgcgtttgattgaccgtccaatccgtcca
ttattccctgaagggtttaaaaacgaagtacaagttgttatcacggtaatgtctgctaac
ccagatatcccaactgatatcatctctatgattggtacttcagcggcactagccatttct
ggaattccatttaatggtccaattggtgcagcgcgcgttggttacactgacggcgaatac
attctaaatacccgtgttgaagaacaagctgacagcgatctagatcttgttgttgctggt
actgaaggcgcggtattaatggttgagtcagaagccgatgtgctttctgaagacgttatg
cttggtgcagtaatgttcggtcacgagcaactacaaacggtagtaacagcagttaaagaa
tttgctgctaacgttagtatcgacaagtgggactggaaaccagaagcagaaaacacaacc
cttaaagataaagtgaaagcattagctgaagctgaaatggttgctgcttaccaaatctct
gacaagcttgctcgcaaagacgcagtaactgctgcaactgaaaaagcacgtgatgctatc
cttgctgaagacgagacccaagataagaaagaagtatcaaaccttcttcatgatcttgag
tctgacgtggtgcgttcacgcatccttgctggcgagcctcgcatcgatggtcgtgatcct
aagatgattcgtgcactagacgttgcaacgggcattttaccacgtactcacggttctgct
gttttcactcgtggtgaaactcaagcaatcgttgcagctactttaggtacagaacgtgac
gcgcaaatgattgacgagcttcaaggtcgtcgtgacagccgcttcatgcttcattataac
ttccctccatactgtgttggtgagactggtatgattggttctcctaagcgtcgtgaaatt
ggtcacggtcgtttggcgaagcgcggtattcaagcagtaatgccaagcgaagaagaattc
ccgtacgtagtacgtattgtttctgaaattacagaatcaaacggttcatcttcaatggcc
tctgtatgtggtacttcacttgcgcttatggatgcaggtgtaccaattaaagcttcagtt
gctggtattgcaatgggtctagtgaaaagcgacgaaaacttcgttgtactttcagacatc
cttggtgacgaagatcaccttggtgacatggactttaaagttgctggtactactggcggt
atcactgcattgcagatggatatcaaaattgaaggtatcactaaagaaatcatgcaaatt
gcccttaagcaggcaaaagaagcccgtttgcatattcttaacgtaatggacgaagctatt
ggcggtcaccgcgaagagcttagcgaattcgctccacgcatttacacagttaaaatcgat
caggataagatccgcgatgttatcggtaaaggcggcgcgatgattcgttcaattactgaa
gaatctgataccaacatcgaaattgaagacgatggtactatcaaaatcttcgcaactgag
cgtgctaaagccgatattgctatcagcaagattgagcaagttactgctgaaatcgaagtg
ggcaaaacttaccacggtaagattacccgtatcgtagatttcggtgcgtttgttgaagta
ttaccaggtaaagaaggcctagtacatatttctcaaatcgctcacgagcgtgttaacaaa
gtaactgactatcttactgaaggtgcgatgattgacgtgaaagtgatggaaattgaccgt
caaaaccgcgtacgtctaagcattaaagagttacttgaaaaacctgctcctaagtctgac
gacgcagagtaa
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