Alteromonas sp. 76-1: ALT761_02039
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Entry
ALT761_02039 CDS
T10165
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
alte Alteromonas sp. 76-1
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alte03400
]
ALT761_02039
Enzymes [BR:
alte01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ALT761_02039
DNA repair and recombination proteins [BR:
alte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ALT761_02039
Prokaryotic type
ALT761_02039
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
VEL97040
LinkDB
All DBs
Position
cAlt76:complement(2311099..2312544)
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AA seq
481 aa
AA seq
DB search
MTVPVSIMWFRQDLRVKDNPALNAACDEGKIIPIYIYDDNANDAKALGGASNWWLHHSLN
SLNERLNNHLKVFKGDPKTLIPALMEAYEAKGIYWNRCYEPWQINRDKAIKKQLLDNDFE
AHSSNGSLLWEPMKVHKKDGTPYRVFTPYYRKGCLNVEPPRYPQAPPARITYADVDDSKN
TKANGSCNIDDLNLLPSLDWDSDFKNHWKPGEDGAADNLQDFIEHSARKYKDARDIPSMN
GTSHLSPHLHFGEVSPNQVWYAIKDRFETSEDKSIDTYLSELGWREFSYYLLYHFPTIPT
KNFNDKFDKFNWRTDAKSLKAWQKGQTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKN
LLISWQEGERWFWDCLVDADLASNTAGWQWVAGTGADAAPYFRIFNPLLQGEKFDKQGKY
VRKYCPELADLPDKYIHKPWDAPPVIAKDAGVHLGDTYPKPIVDLKASRQRALDAFQALK
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtgccagtgtcaataatgtggttcagacaggaccttagagtaaaagataacccc
gcgttaaatgcagcctgtgatgaaggaaaaataatcccgatttacatttacgatgataat
gcgaacgatgcaaaagcattaggaggcgccagtaactggtggttacatcactcgttgaat
tcattgaacgagagattgaataatcacctaaaggtatttaaaggcgatcctaaaacgctt
atccctgcattaatggaagcctatgaagcgaagggaatctattggaatcgctgctatgag
ccttggcaaattaatcgagataaagcgattaaaaagcagcttttagacaatgactttgag
gcgcacagcagtaacggtagtttgctgtgggagccgatgaaggtgcacaaaaaagacggg
acgccgtaccgagttttcaccccatattatagaaaaggttgtttgaacgttgagcctcca
cgctatcctcaagcaccgccagcacgaattacatatgccgatgttgatgacagtaaaaat
actaaggctaacggctcttgtaatatagacgatctcaacttacttccttcgctagattgg
gacagtgattttaaaaatcactggaaaccaggtgaagacggtgccgctgacaatttacaa
gattttatcgagcactctgcccgcaaatataaagatgcccgtgatattccgtcaatgaat
ggaacctctcatctatcaccgcatctgcattttggcgaagtgtcgcctaatcaagtctgg
tatgccattaaagataggtttgaaaccagtgaagataaaagtatagatacttacctaagt
gagttgggctggcgcgagtttagctattacttgctttaccattttccaaccataccgacc
aaaaactttaatgataaatttgataagttcaattggcgcactgatgccaaatctcttaaa
gcatggcaaaaagggcaaaccggtatccctattgtcgacgcaggtatgcgagaactgtgg
caaaccgggtatatgcacaaccgtgttcgtatgattgtaggttctttcctggttaaaaat
cttcttattagttggcaagaaggcgaacgttggttctgggactgcctagtagacgctgat
ttagccagcaataccgctggttggcagtgggtagcaggcacaggcgctgacgcagcaccg
tatttcagaatttttaacccgttattacagggagaaaaatttgataaacaaggaaagtac
gtcaggaagtactgccctgaacttgccgaccttcctgataaatacatacataagccttgg
gatgcgccgccggtcattgctaaagatgcaggcgtacatctaggggatacttatcctaaa
cctatcgtagatttaaaagcatcgagacagcgtgctttagatgcctttcaggctttaaaa
gagtag
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