Alteromonas sp. 76-1: ALT761_02449
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Entry
ALT761_02449 CDS
T10165
Name
(GenBank) DNA helicase/exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
alte Alteromonas sp. 76-1
Pathway
alte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALT761_02449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alte03400
]
ALT761_02449
Enzymes [BR:
alte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ALT761_02449
DNA repair and recombination proteins [BR:
alte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALT761_02449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
VEL97445
LinkDB
All DBs
Position
cAlt76:complement(2761911..2765522)
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AA seq
1203 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLIKHQPNGVFTPETILVESPGMQHWVSMQLAKEQGVAMNLD
FPLPVRFMWNTARLVLGKDKVPKQSPYRREVLVWRIDALLLEASGLEGSGRETSLQSMAA
FEQVNKYWLQAGSEQEQGVQRLQLATALADVYEQYLLYRPDWLFAWEENQRKTNDESEIW
QSEIWRHLAKQEPLHPARLHQLTLTALNNGDHLKSGDNELPKRIVVFAINTMAPQLIAFF
DALAAHIDIHIFHLNPSVNYWGDAKSDSELARQLRIDGLEKWMQQDQSNPLLGNLGQQGR
ELFNLLTDLETFEVSAFDAPIPADSETGETLLLNQIHNDILEALPAMPFASIQSTEPDTT
DNADDSVTIMCTHSALREVQVLHDHLLHWLSQDSSRTPSDVLVMCPAIENYAPFVDTVFH
RVGTKPLGGNGPVRLPCSIADRSPMDAEPLIAAYMTLLHLPDSRFGVSDIVDYLQLDAVQ
KRFSIAQDDIDQMTVWLKQAHIHWGLNGSHKANVSAGATHENTYSWWWGIKRLLLGMLAP
DSEGVIDNMLTIPDVEGQSTVTLGKLIHVIELLGKFATELNTPRSPNAWGADLLALRDTC
FTPTKEQEHSWDLIAKVAADLSARCEEADYTYDLSLRQVRELLLSRFSSPDAGNHFMTGQ
VTVCSMLPMRSIPFKKVCILGLNDSEFPRKSTPLGLDLMAGPDRRVGDRSRRLEDRYLFL
EAIISARESLYLSYQGNDVKNNSERQPSLVLGEFLDMLDTGYQVNIDHYLKHAPLHPFSE
SAFTGTLPSYETGWLRLAQSLRDAATSAPNNDTSKESSEEAGEQEHSLAPLAVDSTPENT
SFQCMQVARAFSDPLAFFSQQRLGVNLSQSVTLLDNSEPFETNALVRYQVLDAMFSSSAS
FDDANAATLQHSDRVVQFAALRGDIPNNPVAQEELELWKESAVALTQAMGPHDAEPKRAQ
FAGNHFTFTASALEGGNSLMQPCAGKVNDIRALGYFMTQLVFSASDEVTPYTQYPLDIFY
CDWVKGETKLMKRSFPSVDKTTACQILLSIESLFVDVLSAPTPVYSSLMSAVVSGTKKSP
GTLLANKVTLPTFLASLGDHDIEDSESVDKNGGVGTGNVVDTEDTGEPGKSLVPDIRAFF
ASDDAERILKNWLQSSGQFTADIASNPYVKWLFPDGVSWHDMPTTHAFLLFALVANISSQ
EQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgcgctttatccatcgaacaaacttgaacacctcagcttccttcttactacgcta
atcaagcatcaacctaatggtgtttttacccctgaaacgatattagttgaaagccctggt
atgcagcattgggtaagtatgcaacttgccaaagagcagggcgtggcgatgaatcttgat
tttcctttgccggttcgatttatgtggaacacggcaaggctggtgttgggtaaagataaa
gtgcctaagcagtcgccttatcgacgtgaagtcctcgtctggcgcattgatgcactttta
ctggaggcatcgggactagagggatcaggacgagagacatctctgcaatcgatggcagcg
ttcgagcaagttaataagtactggttacaagcgggaagtgagcaagagcagggcgtacaa
cggttgcaattggcaacggcgctggccgatgtgtacgagcaatatttgttatatcgtcca
gattggttgtttgcatgggaagaaaaccagcgtaaaaccaatgatgaatctgaaatttgg
caaagtgaaatatggcgccatctagccaagcaagaacctttacatcctgcacgactgcac
caactcaccctgactgcgttaaataacggcgatcatctaaaaagtggtgataacgaatta
cccaaacgtattgtggtgttcgctataaacaccatggcgccgcagttaattgcctttttt
gatgcattagcggcgcacattgatattcatatttttcatctgaacccaagtgtgaattat
tggggcgatgcgaaaagcgatagtgaactcgcaaggcagctgcgcatagatggcctagag
aaatggatgcagcaagaccaaagtaacccgctattaggtaatttgggccagcagggcaga
gagctttttaatttgctcaccgatttagagacgtttgaagttagtgccttcgacgcgcct
attcctgcagatagtgaaacgggtgaaacgttactattgaaccaaattcacaacgatata
ttggaagcgttacctgctatgcctttcgcaagcatacagagcacagaaccagacaccacc
gataacgctgacgacagtgttaccattatgtgtacgcattcggcgctacgtgaagttcag
gtgttgcacgatcatttactgcactggttatcgcaagactcatcgagaacgccatccgat
gtgctggtgatgtgcccggcgatagaaaactacgccccatttgttgataccgtatttcat
agagtgggaaccaaacccttagggggcaatgggcctgtacgcttgccatgttctatcgca
gatagaagccccatggatgcagagccccttattgctgcttacatgacgctacttcattta
cctgacagccgttttggcgtatcagatatcgtggattacttacaacttgatgcggttcaa
aagcgctttagtattgcacaagacgatattgatcaaatgacggtatggcttaagcaagcc
catattcactggggattaaatggcagccacaaagccaatgtatcggcaggagccacccat
gaaaacacttacagctggtggtggggaattaagcgtttattattaggtatgttagcgcca
gatagcgaaggtgttattgacaacatgctgaccatccctgacgtggaaggtcagtcgacg
gtaacgctaggtaagcttatccatgttattgagttactagggaagtttgccactgagctt
aataccccgcgaagtccgaatgcatggggtgccgatttattagcactgcgtgatacctgc
tttacgccaaccaaagaacaagaacacagctgggatcttattgctaaagttgccgctgat
ttgtctgctcgatgtgaagaagccgattatacctacgatttaagtttgcgtcaggtgcgg
gaattactgttaagtcgattctcctctcctgatgcgggtaaccacttcatgacggggcaa
gtcacggtatgctccatgctacctatgcgtagtatcccgttcaaaaaagtgtgcatatta
gggcttaatgacagcgagtttccgcgtaagtctacgccgttaggactcgatttaatggct
ggacctgatagaagagtgggcgatcgttcgcgtcgtttagaagacaggtatcttttttta
gaagcgattatttcggccagagaaagcctgtatttaagctatcaaggcaacgatgtaaaa
aataacagtgagcgtcagcccagcctagtgttaggcgaatttctcgatatgttagacacc
ggctatcaagtaaacattgatcattatttaaaacatgccccgttgcacccgtttagcgaa
agtgcttttaccggcacacttccaagctatgaaacgggttggttgcgtctagcccaatca
ctacgtgacgccgctaccagtgctcccaacaatgacaccagcaaagaaagcagcgaagaa
gctggggaacaagaacattcactcgcgcctttagcggtagacagcacacctgaaaatacc
agctttcagtgtatgcaagtggcacgagcgtttagcgacccactagcgttcttttctcag
cagcgattgggggtaaatttatcccaatcggtgactttgctagacaatagcgaacctttt
gaaaccaacgcactagtacgctaccaagtactcgatgctatgttttcttccagtgcttca
tttgatgatgctaatgcagcaacccttcagcacagcgatagggtagtgcaattcgccgcg
cttcgtggtgacattcccaataacccggtggcgcaagaggagcttgagctgtggaaggaa
agcgcggtagctcttacccaagcgatggggcctcatgatgctgaacccaaacgggcgcaa
tttgcaggcaaccactttacgtttaccgcgagtgcgcttgaaggtggaaacagcttgatg
cagccgtgcgcaggcaaggtgaatgacattagagcgttaggttactttatgacacagctt
gtgtttagcgcaagcgatgaagtaacaccctatacacaatacccgctagatatcttttac
tgcgattgggtaaaaggtgaaactaagctaatgaagcgtagctttccgtcagtagacaaa
accacagcctgccaaattttactaagtattgaatcattgtttgttgacgtattgagcgcc
ccaacgcccgtatatagctcattaatgagtgcggtagtcagtggcacaaaaaaatccccc
ggaactcttctggcaaacaaagtcaccttacccacatttctggcaagccttggcgaccac
gatatagaagatagtgaaagtgtagataaaaacggtggtgttggtactggaaatgttgtt
gatactgaagacacaggtgaacccggcaagtcgctagtacccgatatacgtgcatttttt
gccagtgatgatgccgagcgcatactcaaaaattggcttcagtcatcagggcaatttact
gctgatatcgcgagtaacccttatgttaaatggttattccctgatggcgtgagttggcat
gatatgccaaccacacacgcatttttgttgtttgctttggtggctaacatttcatcacag
gagcagctatga
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integrated database retrieval system
