Alteromonas sp. 76-1: ALT761_03927
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Entry
ALT761_03927 CDS
T10165
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
alte Alteromonas sp. 76-1
Pathway
alte03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALT761_03927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alte03000
]
ALT761_03927
03400 DNA repair and recombination proteins [BR:
alte03400
]
ALT761_03927
Enzymes [BR:
alte01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ALT761_03927
Transcription factors [BR:
alte03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ALT761_03927
DNA repair and recombination proteins [BR:
alte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ALT761_03927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
VEL98892
LinkDB
All DBs
Position
cAlt76:complement(4534270..4535682)
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AA seq
470 aa
AA seq
DB search
MNTDIKDSAHVDNEHRETYAKARVSRDARFDGRFFVAVKTTGIFCRPICPAKLPDEKNVA
YYNHAAKAMSDGFRPCLRCRPDSAPSSFAWLGVGTTVTRALTLLSDIPVQSISTISSRLG
ISERYLNKLMVSHTGLSPKQYQDLQRVLFAKQLLQQSTMKLTDIAFSAGYASTRQLQRAV
QTYCKKTPTELRSKRHTALPEISLRLHFRPPYHWQQVREFLALRAIRGVEKVSEDTYCRY
ISVKGELGFISATFNESANGFDVKMRLPNLAYVYKTVEQIKQLLDLHAAPELIEKSLLAA
GLPDNLLTKGLRLPGTWTVFESGCRAIVGQQVSVKAAINQAGLLAQHLGAVGTEEPVEQN
QRYCFPEPEAVANSELTFLRMPNARKLALRDFAALFCNGNQPTHDEILSIKGVGQWTLDY
LKMRGERNPDVYLAGDLIVRKMAEKYPVLPQKAAPWQSYLTLQLWQLSNG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgacataaaagattcagcgcacgtagacaatgagcaccgcgaaacttacgct
aaagctagggtaagtagagatgcccgctttgatggccgtttctttgtggcggtgaaaacc
acgggcattttctgtcggccaatttgccctgcgaaattgccagatgaaaagaacgtggct
tactataaccacgctgctaaagccatgagcgatggctttcgtccctgtttacgatgcagg
cccgacagtgcaccgtcttcttttgcgtggttaggggtaggcacaacggtaacaagagcg
ctaacgctattaagtgatatacccgtgcagtctatctccaccatttcaagccggttgggt
attagtgagcgttacttaaataaactcatggtgtcgcatacggggttgtcgcccaaacaa
tatcaagatttacaaagggtgctgtttgctaagcagctactacagcaatctaccatgaag
cttactgacatcgcgtttagcgccggatatgcttctacaaggcagcttcagcgagcagtg
caaacctattgcaaaaaaacgcctaccgaattacgaagcaaacgccatactgctttgcct
gaaatatctcttaggttgcacttcaggccaccttaccactggcagcaagtacgtgaattt
cttgctttgcgcgctattcgtggcgtagaaaaggtgtctgaagatacctactgccgttat
atcagcgtaaagggtgaattggggtttattagcgcgacttttaacgagagcgcaaatggc
ttcgatgtaaaaatgcgtttgccaaatttggcttacgtgtataaaacggttgaacaaatc
aagcagctgctcgatttacatgcagccccagagttaatagaaaaatcgctattagcagcg
ggtttgcctgataatcttcttactaaagggttgcgacttcctggtacatggactgtgttt
gaaagtgggtgcagagcgattgttgggcagcaagtcagtgtgaaagccgcgattaaccaa
gctgggctgcttgcacagcatttaggggcggtaggcactgaggaacccgtcgagcaaaac
caacgttattgttttcctgaacccgaagcggttgccaatagtgagttaacttttttgcgt
atgcctaacgcccgtaagcttgcacttcgtgattttgcggcgttgttttgtaatggtaac
cagcctactcatgatgaaatattgtcaatcaaaggggttggtcaatggaccttagattac
cttaagatgcgaggtgaacgtaaccctgatgtgtacttggctggcgaccttattgtaaga
aaaatggccgagaaatatccggtgttgccgcaaaaggcggcgccatggcaaagttactta
acactacagctgtggcagttgagtaatggttaa
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