Alteromonas sp. CI.11.F.A3: R1T43_01545
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Entry
R1T43_01545 CDS
T11490
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
altf Alteromonas sp. CI.11.F.A3
Pathway
altf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R1T43_01545 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altf03019
]
R1T43_01545 (groL)
03110 Chaperones and folding catalysts [BR:
altf03110
]
R1T43_01545 (groL)
03029 Mitochondrial biogenesis [BR:
altf03029
]
R1T43_01545 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
altf04147
]
R1T43_01545 (groL)
Enzymes [BR:
altf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R1T43_01545 (groL)
Messenger RNA biogenesis [BR:
altf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R1T43_01545 (groL)
Chaperones and folding catalysts [BR:
altf03110
]
Heat shock proteins
HSP60 / Chaperonin
R1T43_01545 (groL)
Mitochondrial biogenesis [BR:
altf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R1T43_01545 (groL)
Exosome [BR:
altf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R1T43_01545 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R1T43_01545 (groL)
Exosomal proteins of breast cancer cells
R1T43_01545 (groL)
Exosomal proteins of colorectal cancer cells
R1T43_01545 (groL)
Exosomal proteins of bladder cancer cells
R1T43_01545 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WOI37750
LinkDB
All DBs
Position
347776..349416
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVRFGNDARTKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVTEGHKSVAAGMNPMDLKRGI
DKAVLAAVEELKALSTDCADSKSIAQVGTISANSDSEVGDIIAQAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDSPFILLVDKKISNIRELLPTLEGV
AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVELEDLGTAKRVVINKDNTTIVDGNGDEEAIEGRCAQIKGQIEDSSSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKLASLTGENEDQTVGIKLALRAMEAPLRQIASNAGAEASVVVNEVKNGDGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIADIPQDEAAPAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtacgttttggtaacgacgctcgtacaaaaatgcttaaaggcgta
aacacgctagcaaacgcagtgaaagttacactaggtcctaaaggccgtaacgtagtacta
gataagtctttcggcgctcctaccatcactaaagatggtgtatctgtagccaaagaaatc
gaacttgaagacaagtttgagaacatgggcgcgcagatggttaaagaagttgcgtctaaa
gcgaatgacgaagcgggtgacggtactactactgctaccgtgcttgcacaagctatcgta
actgaaggtcataagtctgttgctgcaggcatgaacccaatggatcttaagcgcggtatc
gacaaagcagtacttgctgcggttgaagagcttaaagccctatctactgattgtgctgac
agcaagtcaattgctcaggttggtactatctctgcaaactctgattcagaagttggcgac
atcattgcgcaagcaatggaaaaagtaggtaaagaaggcgtaattaccgttgaagaaggt
caagcacttcaaaacgaactagacgttgttgaaggtatgcagttcgaccgcggttaccta
tctccttacttcattaacaaccaagagaacggtactgttgaactagacagccctttcatc
ctattggttgataagaaaatttctaacatccgtgagttgcttcctacccttgaaggcgta
gcgaaagcaggtaagccactgatgattattgctgaagatgttgaaggcgaagccctagct
acactagtagttaacaacatgcgcggtattgttaaagttgctgctgttaaagcacctggc
tttggcgaccgtcgtaaagcaatgcttcaagacatcgctatccttactggtggtacggtt
atctctgaagagattggtctagaccttgaaaaagtagagctagaagaccttggtactgct
aagcgcgtagttatcaacaaagacaataccactattgttgatggtaacggcgacgaagaa
gcgattgaaggccgttgtgctcaaattaaagggcagattgaagactcttcttcagactac
gacaaagaaaagcttcaagagcgtttagctaagctttctggcggtgttgcagtaattaaa
gtgggtgcagctaccgaagtagaaatgaaagagaagaaagaccgtgttgaagatgcattg
catgcaactcgcgccgcggttgaagaaggcgtagtacctggtggtggtgttgctctagtt
cgtgcagcagctaagcttgctagcctaactggcgaaaacgaagaccaaactgtaggtatt
aagcttgctctacgtgcaatggaagcgcctctacgtcaaatcgctagcaacgccggtgca
gaagcatctgttgtggttaacgaagtgaaaaatggcgacggtaactacggttacaatgcg
ggcaacgacacgtacggcgacatgctagagatgggtattcttgacccaactaaagtaacg
cgctctgcactacagttcgcagcatcaatcgcatcacttatgattacgactgaagccatg
attgctgatatacctcaagacgaagcagcgcctgcaatgcctgatatgggcggcatgggt
ggaatgggcggcatgatgtaa
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