Alteromonas sp. CI.11.F.A3: R1T43_03180
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Entry
R1T43_03180 CDS
T11490
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
altf Alteromonas sp. CI.11.F.A3
Pathway
altf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
altf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R1T43_03180 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
altf03021
]
R1T43_03180 (rpoA)
03400 DNA repair and recombination proteins [BR:
altf03400
]
R1T43_03180 (rpoA)
Enzymes [BR:
altf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R1T43_03180 (rpoA)
Transcription machinery [BR:
altf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R1T43_03180 (rpoA)
DNA repair and recombination proteins [BR:
altf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R1T43_03180 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WOI39357
LinkDB
All DBs
Position
724099..725088
Genome browser
AA seq
329 aa
AA seq
DB search
MVGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKTEATLTLVKSGAGPVVAGDIQHDGD
VEIVNPDHLVCTLTGEAEISMRIKVEMGRGYVPASTRRSSEEDDRPIGRLLVDASYSPVE
RIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVDLRDVSEPE
AKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
attgtgggttctgtgactgaattccttaaaccgagactagttgagatcgaaaacgtttct
cctactcgtgccaaagtaactttggaaccactagagcgcggctttggccacactctaggt
aacgccctacgtcgtatcttgttgtcatccatgccaggatgcgcagttactgaagtagaa
attgatggcgttcttcacgagtacagcaccaaagaaggtgtgcaagaagacgtaattgaa
atcttgctaaatcttaaaggtttagcggttcgccttgaaggtaaaactgaggcaacccta
actctagtgaaatctggcgctggccctgttgttgctggtgacattcagcatgatggcgac
gtagaaattgttaaccctgaccacttagtttgtactttaactggcgaagctgaaatcagc
atgcgtattaaagtagaaatgggtcgcggttatgtaccagcttctacccgtcgctcctct
gaagaagatgatcgtccaattggtcgtttgttagttgatgcttcatacagcccagtagag
cgtatagcttacagtgtagagtctgcccgtgttgaacaacgcacagacctagacaaattg
attatcgatatggaaacgaacggtactttagatcctgaagaagcgatccgccgttctgcg
actatcctagctgaacagcttgatgcattcgtagatttacgtgatgtatctgagccagaa
gcgaaagaagagaagccggaatttgatccgattctacttcgcccagttgatgacctagag
ctaactgtacgttctgctaactgtttaaaagcagaagctatccagtacattggtgacctg
gttcagcgtactgaggttgagctacttaaaacgccaaaccttggtaaaaaatcgctaact
gaaatcaaagatgttctagcatctcgtggactttctctaggtatgcgcctagaaaactgg
ccgcctgagagcatcgctgaaaaagattaa
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