Alteromonas sp. CI.11.F.A3: R1T43_15705
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Entry
R1T43_15705 CDS
T11490
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
altf Alteromonas sp. CI.11.F.A3
Pathway
altf02020
Two-component system
altf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
altf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R1T43_15705
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R1T43_15705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
altf03000
]
R1T43_15705
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
altf02035
]
R1T43_15705
Transcription factors [BR:
altf03000
]
Prokaryotic type
Helix-turn-helix
Other families
R1T43_15705
Bacterial motility proteins [BR:
altf02035
]
Flagellar system
Flagellar assembly proteins
Others
R1T43_15705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
AAA
AAA_7
bpMoxR
AAA_19
AAA_2
Ribophorin_II
Motif
Other DBs
NCBI-ProteinID:
WOI36625
LinkDB
All DBs
Position
complement(3634195..3635646)
Genome browser
AA seq
483 aa
AA seq
DB search
MKDILLVSDSQELIHSLETIVTFLGESCQSRGLSDCESYLKEKGADAVLIEYASPSVINS
LVARFPHIPFVAILHSNGEVAASCNLVSVITLPLTYPVLTQSIHRCQEYSRRKPGKTRAG
GSKTRLFRSLVGKSDEIQIVRRLVEQVAPTEATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERIYERVGGSKPLQCNVRIIAATHRHLETMIKEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVESVRFTERAIASLMEHNWAGNVRELSNLVERLSILY
PGQIVDVADLPEKYQYGEIQAYEPDYPEELLERDAFNALFAESASQEHFDEPEEESSLPL
SSALPEEGVNLKEYLSELEITLIRQALEQQEWVVARAADKLGMRRTTLVEKMRKYDIQRM
EEV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatattttgctggttagtgatagccaggaactaattcatagcttagaaaccata
gtcacctttttgggagagtcgtgtcagtcacgagggctttctgactgtgaaagttacctg
aaagaaaagggcgcagatgcggtgcttattgagtacgcgtcgccgtcagtgataaattca
ctggttgctcgttttccacacataccattcgttgccattttacattcaaatggcgaagtg
gccgcgtcgtgcaatttagtcagcgtgatcactttaccgcttacttacccagtacttacg
caatcaattcaccgatgccaagaatatagccgcagaaagccgggtaaaacacgcgctggt
ggttctaaaactcggctgtttagaagtttggtgggtaaaagcgacgagattcagatagta
cgccgtttagtagagcaagtagctccaacagaggctacagtgctaattttgggtgaatct
ggtacaggtaaagaagtggtggcacgtaatgtacatttcttgtcagaacgtaaagatggc
ccttttatcccggttaactgcggtgctattcccggcgagcttcttgaaagtgaattgttt
ggtcacgaaaaaggcgcgtttaccggtgcgataagtgctcgtaaaggccgttttgagtta
gccgaaggcggaacattatttctagatgaaattggcgacatgccgttgcagatgcaagtc
aaactgcttcgggtgctgcaagagcgtatttatgagcgagtaggtggcagtaagcctcta
cagtgcaatgttcgtattattgcggctacccatcgtcatctagaaactatgatcaaagaa
gataagtttcgtgaagatctctattaccgcttaaatgtgttccctatcgatagccctgca
ctgcgtcaacgcaaagatgacattcctttgctattgcaagaactcaatagtcgtattcaa
ggtgatggtgtagaaagcgtacgtttcactgagcgcgccattgcatcgttgatggagcat
aactgggcaggtaacgtacgagagctatcaaaccttgttgagcgtttaagtattttatat
ccaggtcaaatcgttgatgtggccgaccttccagagaaataccagtacggtgaaattcaa
gcgtacgaaccagattaccctgaagaattgctagagcgagatgcctttaatgcacttttt
gctgaatcagcctctcaagaacactttgatgaacctgaggaagaaagcagtttgccgctt
tcctctgcgttgcctgaggaaggggttaatctaaaagaatacttatctgaacttgaaatt
accctcattcgccaagccttagaacaacaagaatgggttgtcgctcgcgctgcagataag
ctaggaatgcgcagaaccacccttgttgagaaaatgcgtaagtacgatattcagcgtatg
gaagaagtttaa
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