Constantimarinum furrinae: ALE3EI_1178
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Entry
ALE3EI_1178 CDS
T06763
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
alti
Constantimarinum furrinae
Pathway
alti02020
Two-component system
alti02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alti00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ALE3EI_1178
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ALE3EI_1178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alti03021
]
ALE3EI_1178
Transcription machinery [BR:
alti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ALE3EI_1178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
SPT2_N
HTH_12
MarR
SF3b1
Motif
Other DBs
NCBI-ProteinID:
QNJ97747
UniProt:
A0A7G8PTT1
LinkDB
All DBs
Position
complement(1289747..1291210)
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AA seq
487 aa
AA seq
DB search
MLKQQLNFKLSQKLSPQQIQLMKLIQLPTQAFEQRISQEMEENPALEGGKDDEDPYDDFS
NEDAYEDDYNDGSEVIETDINVDDYLSDDETPSYKLSANNYSADDEEKQTPYASGTSFNQ
HLLQQLNTYRLDDEEEEIAQFLVGSVDESGYIRRDIQDIVDDLAFTQNVYTSEEKVEKVL
KIVQELDPPGVAARDLQECLFLQLERKEPTAEVELATAIIKESFDHFSKKHYKKLLQKFD
ITEDQLRDAIHEIEGLNPKPGGTFSGNTRMVEHVVPDFAIKIVDGELELTLNGRNAPELH
VSREYTNMLKGYKESKDKSKSQKDAVMFIKQKLDAAKWFIDAIKQRQQTLFVTMNSIMHH
QKEYFLTGDERKLKPMILKDIADKIDMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMKN
DQGEDVSTREIKKILEITISEENKKKPLTDDKLAKILKEKGYPIARRTVAKYREQLDMPV
ARLRKEI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaacaattaaactttaaattatcccagaagctttcgcctcagcagattcag
ttaatgaaattgattcagcttcccacgcaggcattcgagcaaaggatctctcaggaaatg
gaggagaatcctgctcttgaaggcggaaaggatgatgaagatccttatgatgattttagc
aatgaagacgcttatgaagatgattataatgatggttcggaagttattgaaaccgacatc
aacgtagatgattacttaagtgatgatgagacccccagttataagctgtcggccaacaat
tacagtgccgacgatgaggaaaagcaaaccccctatgcttcgggcacttcatttaatcag
cacttgcttcagcagttaaatacatataggctggacgatgaggaagaagagatcgcacaa
tttttggtaggaagcgtagatgaaagtggttatattcggagggatattcaggacatcgtt
gatgatctggcatttactcaaaatgtatacacttcggaagaaaaagtagagaaggtactt
aagatcgtacaggagttagaccctccgggcgttgcggcgagagatcttcaggaatgtctt
ttccttcagttggagcgcaaagaacccactgcagaagttgagctggcaacagcgatcata
aaagaatccttcgaccatttttccaaaaagcattataaaaaattacttcagaaattcgat
attaccgaggatcagctgcgggatgccatacacgaaattgaggggttgaacccaaaaccg
ggcggaaccttttcaggaaatacgagaatggtagaacacgtagtgcccgattttgccatt
aagatcgtcgatggtgagcttgagcttactttaaacggtcgaaacgcacccgagttgcat
gtctctagagaatacacaaatatgctaaaggggtataaggaatctaaggataaatcgaaa
tcccagaaggatgcggtgatgtttataaagcaaaagttggatgctgcaaaatggtttatt
gatgctataaaacaaagacagcaaactctttttgtcacgatgaactccattatgcaccat
caaaaggaatactttttaacaggcgatgagcgcaaattaaaacctatgatcttaaaggat
attgccgataagattgacatggatgtttcgactgtttcaagagttgccaatagtaaatat
gtggatacaccttatggtactaagctgattaaggagtttttcagtgaatccatgaaaaac
gatcagggtgaagacgtctcgacgagggaaattaagaagatccttgaaataacgatttcc
gaggaaaacaaaaagaagcccttaaccgacgataaactggctaagattcttaaagaaaaa
gggtatcccattgcccgacgtaccgtggcaaaatatcgcgaacaattggatatgcctgta
gcaagacttagaaaagaaatttga
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