Constantimarinum furrinae: ALE3EI_1716
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Entry
ALE3EI_1716 CDS
T06763
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
alti
Constantimarinum furrinae
Pathway
alti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ALE3EI_1716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alti03021
]
ALE3EI_1716
03400 DNA repair and recombination proteins [BR:
alti03400
]
ALE3EI_1716
Enzymes [BR:
alti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ALE3EI_1716
Transcription machinery [BR:
alti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ALE3EI_1716
DNA repair and recombination proteins [BR:
alti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ALE3EI_1716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QNJ98267
UniProt:
A0A7G8PVA1
LinkDB
All DBs
Position
1885961..1890259
Genome browser
AA seq
1432 aa
AA seq
DB search
MARNKENTVQKFDKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGPV
KDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKIG
YLLGLPSKKLDMIIYYERYVVIQPGIAKYEDGEPVKKMDFLTEEEYLTILDSLPQENLYL
EDSDPNKFIAKMGAECLIDLLNRIDLDSLSFELRHKANNETSKQRKTEALKRLQVVEALR
DANKNRENKPEWMIMKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLME
IKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKTDSNRPLKSLSDSLKGKQGRFRQNLLG
KRVDYSARSVIVVGPELKLFECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDKK
EPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGD
QMAVHLPLGPEAILEAQLLMLASHNILNPANGSPVAVPSQDMVLGLYYMTKLRKSTKELK
VKGEGLTFYSAEEAIIAYNEKQVDLNAEIKIRTKDFNEEGELVYQIITTTLGRVIFNEQV
PEEAGYINEVLTKKSLRDIIGDILSVTSVPTTSAFLDEIKTLGYKFAFEGGLSFSLGDII
IPEEKYTMIDDANTQVDGIIANYNMGLITNNERYNQVIDIWTATNAELTELSMKRIREDQ
QGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSNSGGGEIIENPILSNFKEGLSIL
EYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIINEEDCGTLRGIEVAALKKNEE
IVESLSDRIVGRTALNDVLNPLTKEILVKSGDHITEAVAAKIGNSPIETVEVRSALTCEA
KKGICSQCYGRNLATNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEENKL
TVKFDGKAEIEDLKTVKGEDSEGKTVDIVISRTSEIKLIDEKTGITLSTNNIPYGSTIFV
KNGSKLKAGETVCQWDPYNGVIISEFAGKIKYENIEQGVTYQVEIDEQTGFQEKVISESR
DKKKIPTLQILGKKDEVIRSYNLPVGAHLMVDDGDKIKIGKILVKIPRKSAKAGDITGGL
PRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEIKKYLVKLSNQILVQ
ENDYVRAGMPLSDGSITPEDILRIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVRQ
MMRKVQIVDSGDTTFLENQLAHKDDFIEENDKIFGMKVVVNAGDSENLKEGQIISPRDLR
DENSILRRNDKVLVEARDAETATATPILQGITRASLQTKSFISAASFQETTKVLNEAAVS
GKVDTLEGLKENVIVGHKIPAGTGMRSYDTIIVGSKEELEEMTREKQEVNYN
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaataaagaaaacacagtacagaaattcgataagatttctattggtttggcc
tctcctgagtctattttggcagagtctcgcggtgaagttttaaagcctgaaacaattaac
taccgtacacataagccggagcgtgacggtcttttctgtgagcgtatttttggtcctgta
aaggattacgaatgtgcctgtggtaaatataaaagaatccgctacaagggaatagtttgc
gaccgttgtggtgttgaggtaaccgaaaagaaagttcgtcgtgaccgagtgggacatatc
aatctggtagttcctgtggcacacatctggtatttccgtagtttaccaaacaaaattgga
tatttgcttggattgccttccaagaaactggatatgatcatatactacgaaaggtatgtg
gtaatacaacccggtatcgctaaatacgaagacggggagccggttaagaaaatggatttc
cttactgaagaagagtatcttactattttagattcacttccgcaggaaaatctgtatctg
gaagattcagacccgaacaagttcatcgctaagatgggggcagagtgtttgatcgatcta
ttaaacagaattgatctggacagtctttcattcgaacttagacacaaagcgaataacgaa
acttctaaacaacgaaaaacagaggctttaaagcgtcttcaagtagttgaagcacttcgt
gatgccaataagaaccgagagaacaagccggagtggatgatcatgaaggtagtaccggta
attccgccggaattacgtccgttggtacctcttgatggtggtcgttttgcaacttccgat
cttaatgacttgtaccgtcgtgtgatcattagaaacaatcgcttaaagcgattgatggaa
attaaggctcccgaagtgattctgcgtaatgaaaagcgtatgcttcaggaatctgtggat
tcattattcgacaacacccgaaagtcttccgcagtaaaaaccgatagtaaccgtccgtta
aaatcgctgtccgattcattaaaaggtaagcaaggacgtttccgtcaaaacttattaggg
aaacgtgtagattattcggcgcgatcggtaattgttgttggacccgaactaaaattattt
gaatgtggtcttccaaaggacatggcagccgaactttataagccttttgttatcagaaaa
ctgattgagagaggaatcgtaaaaacggttaagagtgcaaagaagattatagataagaaa
gaacccgtggtatgggatatcctggaaaatgtattgaaaggacaccctgtactattaaac
cgtgctcctaccttgcaccgtttgggaattcaggcgttccagcctaaattaatagaagga
aaagcgatccagttacacccattggtatgtacggcatttaacgccgactttgacggtgac
cagatggcggttcaccttccgttaggtccggaagctattcttgaagcacaattgttaatg
ctcgcatcgcacaatattctgaatcctgccaacggttcgccggtagcagtaccatctcag
gatatggtcttgggtctttactatatgaccaaattgcgtaaatcgacgaaggaattaaag
gtaaaaggagaaggcttaacgttttactcggcagaagaggcaatcattgcttataatgaa
aagcaggttgacctgaatgctgaaattaaaatacgtacgaaagactttaatgaagaagga
gaacttgtttatcagatcatcacaactaccctaggtagagtgatctttaacgagcaggtt
cctgaagaggcaggatatataaatgaagtattgaccaagaaatcacttcgtgatattatt
ggggatattctttcggtaacaagtgtgccgacaacttctgctttccttgatgaaattaag
actctcggatataagtttgcatttgaaggtggcttatcatttagcttgggtgatattatt
atacctgaggaaaagtataccatgatcgatgatgctaacacacaggttgatggtatcatt
gccaactataacatgggacttatcaccaataacgaacgttacaatcaggtgatcgatata
tggacagctaccaatgctgaacttaccgaattgtctatgaaacgtatccgcgaggatcag
caaggattcaactcggtgtatatgatgcttgattcgggagctcgtggatctaaagaacag
atccgtcagttaaccgggatgcgtggattgatggcaaaacctaaaaaatcgaattcaggg
ggtggcgaaattattgagaacccgattctttctaactttaaggaaggattatcaattctt
gaatactttatctccactcacggtgctcgtaaaggtctggccgatacggcacttaaaact
gccgatgcaggttatttaacgcgtcgattggtagatgtgtcacaggatgtgatcatcaat
gaagaagattgtggtactcttagaggaatcgaggttgctgcattaaagaaaaacgaagag
attgtagaatctttaagtgacaggatcgtaggtagaactgcactaaatgatgtgttgaat
ccgttgaccaaagaaattttggtgaaaagcggcgatcatataacagaagccgttgccgcc
aagatcggaaattcaccaattgaaacagttgaggttcgttcggcgttaacctgcgaagct
aaaaagggaatttgttctcagtgctacggaagaaaccttgctaccaacaaaatggtacaa
cgaggagaagccgttggtgttgtagctgcacaatccattggggaacctggtactcagctt
acgctacgtaccttccacgtgggtggtattgccggaaacatttcagaagaaaacaaactt
accgttaaatttgacggaaaggccgagatcgaagacctgaagacagtaaaaggagaggat
tcagaaggaaaaactgtagatatcgttatttcgagaacttcagagatcaaattgatcgat
gagaagaccgggattactttaagtactaataatatcccttacggttctaccatttttgta
aagaatggaagtaaactgaaagcaggtgaaacagtatgtcaatgggatccatataacggg
gtgatcatttctgaatttgccggtaagatcaagtacgaaaatatcgaacaaggtgttacc
tatcaggttgagatcgatgagcagaccggattccaggaaaaagtaatttcagaatcaaga
gataaaaagaagatcccaacgcttcagatccttggtaagaaggacgaggtaattcgctct
tataacttaccggtaggagctcacctaatggtggatgatggcgataagatcaagatagga
aagattcttgtgaagatccctcgtaaatcggctaaggctggtgatattacgggaggttta
ccgcgtgttaccgaattatttgaagcgcgtaatccatcgaaccctgcggttgtaagtgag
atcgatggtgtagtttccttcggaaaaattaagcgtggtaaccgtgagatcatcatcgaa
tctaagcttggtgagatcaagaagtatttggtgaagctttccaatcagatcctggttcag
gagaacgattatgttcgtgcaggaatgccattatctgacggatcgattactccagaagat
atccttagaattaaagggccttcagcagtacagcagtatctggtgaatgaagtacaggaa
gtataccgattacagggagtaaagatcaacgataagcattttgaggtggttgtacgccag
atgatgcgtaaggtacagatcgtggatagtggagacactacattccttgaaaatcagtta
gcacataaggacgatttcattgaagagaacgataagatcttcggaatgaaagtggttgtt
aatgccggtgattcagaaaatctgaaagaaggacagatcatttctccaagggatcttaga
gatgagaattcaattctgagaagaaacgataaggtgttggttgaagctcgtgatgctgaa
accgcaacggcgactccaatacttcagggtattaccagagcatcgttgcagactaagtcg
tttatttctgcggcttccttccaggaaactactaaagtattgaacgaagctgctgttagt
ggcaaagtagatactttggaaggccttaaagagaatgtgattgtaggacataagattccg
gccggtaccggtatgagaagttatgacactataattgtaggttctaaagaagagttggaa
gaaatgactcgtgagaagcaagaagtgaattataactag
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