Alteromonas sp. Mex14: BM527_00855
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Entry
BM527_00855 CDS
T10272
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM527_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altm03019
]
BM527_00855
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_00855
Enzymes [BR:
altm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BM527_00855
Messenger RNA biogenesis [BR:
altm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BM527_00855
DNA repair and recombination proteins [BR:
altm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BM527_00855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
CRS1_YhbY
PB4_spike
Motif
Other DBs
NCBI-ProteinID:
APD84753
LinkDB
All DBs
Position
complement(187674..189515)
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AA seq
613 aa
AA seq
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MTTAIAPSELTPETQHAKTPETVLKEVFGYDAFRDGQGEVIHQVCEGKDALVLLPTGGGK
SLCYQIPALVRSGTAIVVSPLISLMQDQVEQLKALGVNAAYLNSTLEADEQARINDALQA
GKLDLLYVSPERLMQYYFQQSLAHADIALFAIDEAHCVSHWGHDFRQDYRALGQIKSRFP
TIPVIGLTATADSATQADILTQLNLNDPLVYKGSFDRPNIRYRVMSKYKAFDQVVAYVKQ
QEGSGIIYCNSRAKVDDLHAKLFRQGFRCAAYHAGMDTDERELVQRQFLNDKIDIVVATV
AFGMGINKSNVRYVVHHDVPRSVESYYQETGRAGRDGLESEALLLFDEKDAARVKQWIEQ
GEIAERNQIELQKFAAMEAFSEAQTCRRQVLLNYFSQFSDSACGNCDICLDPPKMIDGLV
IAQKVLSCVLRLSQQASSQYVIDVLRGKQLRRLQEAGHHQLSTYGIGKDKSDSYWHNIIN
QLVHKGLIRVDITAHAALRLTEAARPVLKGEVAVQLAVPRLEFKPDKKKAKQAPANYDRT
LFTRLKHLRKVLAEENEVPPYVVFSDATLVDMACKLPTTRNTLLEVSGVGQTKLERYGEA
FIQLIDDYINRDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgcaatcgcgccatcagaattaacgcctgaaacccagcacgcaaaaacgcct
gaaaccgtcttaaaagaggtatttggttacgatgcttttcgcgatggtcagggcgaagtt
attcaccaagtatgtgaaggaaaagacgcacttgttttgctacctacaggtggcgggaaa
tcgctgtgctatcaaatccctgcactggtgcgaagcggcaccgctattgtcgtttcaccg
cttatatcgcttatgcaggaccaagtagagcagctaaaagcgcttggcgtaaacgccgcc
tatcttaattccacgctggaagctgacgaacaagcgcgcataaacgatgccctccaagct
ggtaagctggatttactgtacgtatcgccagagcggttaatgcagtactatttccagcag
tcgctagcccacgccgacatcgctttatttgccattgatgaagcgcactgcgtttcccat
tggggtcatgattttaggcaggattatcgcgccttgggtcaaataaaatctcgttttccc
actattcctgtcattgggctaacggctacagcagattcggccacccaagcagacatactg
acgcagctaaaccttaacgacccgctggtttataaaggcagcttcgacagacctaatatc
cgctaccgcgtaatgagcaagtacaaagctttcgaccaagttgttgcttacgtaaagcag
caagagggcagcggcattatttactgcaacagtcgtgcgaaagtcgatgacctgcacgct
aaattatttaggcaagggtttcgctgcgcggcctatcacgccggtatggataccgacgaa
cgagagttagtacagcgtcagttccttaacgataaaattgatattgtggtcgccaccgtt
gcctttggcatgggtattaacaaatcaaacgtgcgttacgtggtgcatcatgatgtaccg
cgcagtgttgaaagctattaccaagagactgggcgcgcagggcgagatggcctagagtct
gaagccctattattgtttgacgaaaaagacgcggcccgcgtaaaacaatggatagagcaa
ggcgaaatagctgagcgcaaccaaatagagctgcaaaagttcgcggccatggaagccttt
tcagaagcacaaacctgccgacggcaagtactgctgaactatttttcgcagtttagcgac
agcgcctgtggaaactgtgacatctgtttagacccgcctaaaatgattgacggtttagtg
atagcgcaaaaagtactgtcgtgcgtacttaggctttcacaacaagcctctagtcaatat
gtgattgatgtattgcgaggcaagcagctaaggcgcctccaagaggcgggccaccatcag
ctttctacgtatggtataggcaaggataaatcggacagctactggcacaacattatcaac
caacttgtgcacaaagggcttattcgcgttgatataactgctcacgccgcactgagatta
accgaagccgcacggcccgtactaaaaggcgaagtcgccgttcaattagccgtaccgcga
ctggaatttaaacccgataagaaaaaggcaaagcaagcgcctgctaactacgacagaacc
ttgtttacgcgcctcaagcacttgcgcaaggtgttggccgaagaaaatgaagtgccgccg
tatgttgtatttagcgacgccactttagtggatatggcgtgtaagctacctactacacgc
aacacgttattagaggtaagcggtgtgggccaaaccaaattggaacgctacggtgaggcg
tttattcagctcattgacgactatataaatcgcgacctttaa
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