Alteromonas sp. Mex14: BM527_00880
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Entry
BM527_00880 CDS
T10272
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03420
Nucleotide excision repair
altm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BM527_00880
03430 Mismatch repair
BM527_00880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_00880
Enzymes [BR:
altm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BM527_00880
DNA repair and recombination proteins [BR:
altm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BM527_00880
MMR (mismatch excision repair)
Other MMR factors
BM527_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
APD84757
LinkDB
All DBs
Position
complement(194215..196386)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEANLPENFQIIDSDDQY
RLIRRILKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHIETHGDHIQKTMREVYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGD
NNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNEPTTIRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDAQGELISVYAGFNELDEARFIVSKIKDWLNQGNALSDTAILYRNNAQ
SRVLEEALLHEGLAYRIYGGLRFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIG
EKTLSQVRDTARMHNCSMWQASQLLINEGGFKGRALNAMQSFVLLITELEQATLDEPLEQ
QADKAIRQSGLYAMYQAERGEKAQARLENLEELVSACKTFIVPEEAEEMSPLAAFLAHAS
LEAGETQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPADCVEEVRLKSTISRPVHNRFS
QATSHASFEETGFSLGERVIHRKFGEGIVLNYEGSGEHGRVQVNFDEFGSKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctcgactgctagacgagcttaacgacaaacagcgtgaagcagtagcagcc
ccattgtctaatgctctagtattagctggcgcaggtagtggcaaaacccgcgtattagtg
catcgcattgcgtggttgatggaagtcgaaaacatcgcacctttttctattctcgcagtt
acctttaccaataaggcagcgaaagagatgcgcggccgtattgagtcattgatgggtcgc
agcttgcacaatatgtggattggtaccttccacggacttgcacatcgcctattacgcgca
caccacgctgaagctaacttgcctgaaaactttcagattatcgattctgacgatcagtac
cggttgattcgccgcattctgaaagccatgaatttggacgaaaaacattgggcccctcgt
caaatccagtggtacataaacggcaataaagacgaaggcctgcgtcctcagcatatcgaa
acccatggcgatcatatccaaaagaccatgcgtgaagtctacgccgcatatcaagacgcc
tgcgaccgttcaggcttagttgattttgccgagcttttactacgcgctcatgagttatgg
gcaaagaaccctgaagtgttggctcactatcaacgccgtttccgtgctgtgctagttgac
gagttccaagataccaacaatatccaatatgcatggcttcgtatgctgtgtagcggcgac
aataacaacattatgatagttggcgacgacgatcagtctatttacggctggcgcggtgca
aacgtagataatattcagcatttccttaaagactttaacgagcctaccactattcgtctt
gagcagaattaccgttctaccgggaacattctgaaagcagcgaacacggttatcgacaac
aacacgggtcgtttagggaaagaactgtggacagaagacgcgcagggcgagctgatttct
gtttatgccggttttaacgaattagacgaagcccgatttattgtttctaaaattaaagac
tggttaaatcaaggcaatgctcttagcgacaccgctattctttatagaaacaacgcccag
tctcgtgtattggaagaagccttattacacgaagggttggcttaccgcatttacggcggt
ttgcgcttcttcgaacgccaagagattaaagatgcccttggctatatgcgcatggtgagc
cacccccacgatgacgcggcttttgaacgtgtggtaaacaccccaagtcgcggtattggt
gagaaaaccctatcgcaagtacgtgatactgcacgtatgcataactgttctatgtggcaa
gccagccagctacttataaacgaaggtggctttaaaggccgcgcgttaaacgctatgcaa
agctttgtattactcattacagagcttgaacaagccacattagacgagcctcttgagcaa
caggctgataaagccattcgccaatctggtctgtacgccatgtaccaagcagagcgcggt
gaaaaggcccaagcacgactagaaaacttagaagaattggttagtgcttgtaaaaccttt
atcgtacctgaagaagcggaagaaatgtcacctttagctgcatttctagctcacgcatct
ttggaggcgggcgaaactcaagccgataaagaccaagacgctgtgcagatgatgactatc
cacactgcaaaaggccttgaattcccattggtgttcttagccggcgtggaagaaggtatg
ttccctagccagatgaccaacgatgaaccaggtcgtatggaagaggaacgcagactttgc
tatgttggtatgactcgcgcaatgcaaaagttatatatcacttacgcagaaagtcgtcga
ttatatggtcaagataagtatcatacggcttcgcgctttattcgcgagatgccagcagat
tgtgtggaagaagttaggcttaaatccaccatctcgcggcctgtacataaccgctttagc
caagcaacctcgcacgccagttttgaagaaacaggctttagtttaggtgagcgcgttata
caccgtaaattcggggaaggcattgtgcttaactacgaaggtagtggtgagcatggccga
gttcaagtaaactttgatgaatttggcagcaaatggctggtacttgcttacgcaaagctg
gagaaagcgtaa
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