Alteromonas sp. Mex14: BM527_02180
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Entry
BM527_02180 CDS
T10272
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM527_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altm03019
]
BM527_02180
Enzymes [BR:
altm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BM527_02180
Messenger RNA biogenesis [BR:
altm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BM527_02180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APD84995
LinkDB
All DBs
Position
complement(497622..498908)
Genome browser
AA seq
428 aa
AA seq
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MPTHLTDTHFSDLPINGKVVDALTAANFSHCTPIQALALPPLLEGHDIAGQAQTGTGKTI
AFLVATFHYLLSKAENVDNSKSNGPRAIIMAPTRELAVQIYNDAKLLSEHTGLSLGLIYG
GEGYQSQRETLEEGVDIIIGTTGRILDYYKQNVFTLKNIQVAVLDEADRMFDLGFIKDIR
FLFRRMPPASERLSMLFSATLSYRVQELAYEHMNNPTHVQVAPEQTTATRVSQELFYPSD
DDKMLLLLTLIEEEWPEKAIVFANTKSSCEKVTDWLTADGHRVGLLSGDVPQKKRLGILE
DFTKGNLDILVATDVAARGLHIDAVTHVFNYDLPDDAEDYVHRIGRTGRAGQSGIAISFA
CEKYALNLPAIEQYINQTIPVTDYDRSALLEDITPPKPRRRRAPSNRNTSRRGNSRGRGK
PQNRNNRA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcacttaactgatactcatttttccgacctgccgattaacggcaaggttgtt
gacgccttaacggcagctaatttttcacattgtacaccaattcaagcacttgcactgcct
ccattattagaaggacacgacattgcaggtcaggctcaaacaggaaccggtaaaactatt
gcctttttggtggctacatttcactatttgctaagcaaagcagaaaatgtagacaacagc
aaatcaaatggcccgcgcgctatcattatggcgccaaccagagaactcgccgttcaaatt
tataacgacgccaagctacttagtgagcacaccggattgtcgcttggtttgatttatggg
ggcgaaggttaccaaagtcaacgtgaaactttggaagaaggggtggatattattatcggc
acgacaggacgcattctggactattataaacagaacgtgtttacactgaaaaatattcag
gttgccgtgctagatgaagccgatcgaatgttcgatttaggttttatcaaagatattcgt
ttcctattccgtcgtatgccacctgcgagcgaacgcttaagtatgctgttttcagctacc
cttagctatcgcgttcaagagctggcttatgaacacatgaataatccaactcacgttcaa
gtggcacctgaacaaaccaccgctacccgtgtatcgcaagaattgttctacccttctgac
gatgacaaaatgttgctgcttctcacgcttattgaagaagagtggccagaaaaagcgatt
gtctttgccaacactaagagcagctgtgaaaaagtcactgactggttaactgctgatggc
caccgcgtgggcttactcagcggtgatgttccgcagaagaaacgcttgggaatacttgaa
gacttcactaagggtaacttggatattttggttgcgacagatgttgcggctagaggtctt
cacatcgacgccgttacccatgtttttaactacgatcttccggatgatgccgaagattat
gtacaccgtataggtcgtacagggcgtgcgggacaaagcggtatcgcaattagttttgct
tgcgagaaatatgcgcttaatttacctgcaattgaacaatacattaaccagactatacct
gtgactgattatgatcgcagtgcgcttcttgaagatattacgccaccaaaaccgcgtaga
agacgtgcacccagtaatcgtaacacatcgcgtcgcgggaatagtagaggccgtggaaag
ccccaaaatcgaaacaatagggcgtaa
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