KEGG   Alteromonas sp. Mex14: BM527_02530
Entry
BM527_02530       CDS       T10272                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
altm  Alteromonas sp. Mex14
Brite
KEGG Orthology (KO) [BR:altm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:altm03016]
    BM527_02530
Enzymes [BR:altm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     BM527_02530
Transfer RNA biogenesis [BR:altm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BM527_02530
 Prokaryotic type
    BM527_02530
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: APD85057
LinkDB
Position
complement(567286..568371)
AA seq 361 aa
MKPLHTDHWQYYFAKPVSTGIVKFQADDFQVVEDLGYMPCGEGEHQFVFVEKTNTNTAFV
AEQLARFVNLPLRQITYAGRKDKYAVTQQWFGIHAPGKPDFDFSNFELEGVKVLKQIRHN
KKLRTGQLKGNHFTIALRQVLHPEAIEERLREIEKHGVPNYYGEQRFGVMRLNDMGEVQR
GGNLVMAERMVNGETIRHRNKRSMALSALRSWLFNEMLSARLEQGLFDSVLQGDALVLSG
SNSFFINNGPTGSQEQQDAQARFDSKDVCPSAPLWGKGALVSQTDALTLEHSVAKQNSEV
IDFLSQCGVEQERRAIKIWPSQLEWQSKGDTFTISFALPSGCFATSVLRECVETLSPINR
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagccgctacacactgaccactggcagtattacttcgcaaaacctgtatcaacgggc
attgtcaaatttcaagctgacgactttcaagttgtagaagaccttggctatatgccgtgc
ggtgaaggcgaacatcaattcgtatttgttgaaaaaacgaacaccaataccgcttttgtc
gctgagcaactggctcgcttcgtaaatcttcctttgcgccaaataacctacgctggtcgc
aaagacaaatatgcggttactcagcagtggttcggtattcacgcaccgggcaaaccggat
tttgactttagtaactttgagttagaaggcgttaaagtactaaaacaaatacgccacaat
aaaaaactacgtacaggtcaattaaaaggtaaccactttaccattgcgttacgtcaggtg
ctgcatcctgaagcgattgaggagcgcctgcgagaaattgaaaagcacggcgtccccaat
tactatggtgaacagcgtttcggcgttatgcgtttaaatgatatgggtgaggttcaacga
ggtggtaatcttgtcatggccgaacgcatggtaaatggcgaaaccatcaggcaccgcaat
aaacgctctatggcactttctgcgctgcgtagttggttattcaacgagatgttgtctgcc
cgtttagaacaaggtctgtttgacagcgtgctccaaggtgatgctttagttcttagcggt
tcaaatagcttttttattaataatgggccgacaggctcgcaagagcaacaagacgcgcag
gcccgttttgactcgaaagacgtgtgtccctcagcaccgctttggggtaaaggtgcgctc
gttagtcaaacggacgcattaacacttgagcactcggttgctaaacaaaatagtgaagtt
atcgactttttgagccaatgcggcgttgagcaagaacgtcgagcaataaaaatttggcct
tcacagcttgaatggcagagtaagggtgatacatttactatctcctttgcgcttcctagc
ggctgttttgcaacctcagtccttagggaatgtgtggaaaccttatcccccattaatagg
gtttaa

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