Alteromonas sp. Mex14: BM527_03215
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Entry
BM527_03215 CDS
T10272
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
altm Alteromonas sp. Mex14
Pathway
altm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BM527_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_03215
DNA repair and recombination proteins [BR:
altm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BM527_03215
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BM527_03215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
hGDE_N
Motif
Other DBs
NCBI-ProteinID:
APD85177
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All DBs
Position
741443..742156
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AA seq
237 aa
AA seq
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MNNEWLNAYVLHRRPYRETSYIVDFFTLEEGRISAVAKGVKNSKSDKKSLLQPFQHLRLQ
LSGKSELKNLRHVESVSPSINLAGTALFCAMYVNELTNRIMPAGLASDGVHNAYENALLS
LRDENDIEVTLRQFEFALLDEMGLLPDFTTDVEYEMPIVESGSYHFQMDAGFIRLPEDAA
GARGMRGLPGQALLSLSQGEFTPLSKKVAKVLCRDLLKPLIGDKPLKSRELFMSKPR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaatggttaaatgcctatgtgttacatagacgcccctacagggaaaccagc
tatattgttgattttttcacgttagaagaagggcggataagtgcggttgcgaaaggcgta
aagaacagtaagtcagataaaaaaagtctgctccaaccttttcaacaccttcgtttgcag
cttagtggtaaatcagagctaaaaaacttgcggcacgttgaaagtgtttctccctccatc
aatcttgcgggtaccgccttattttgcgccatgtatgtcaatgaattaactaaccgcata
atgcctgcaggtcttgccagcgatggcgtgcacaatgcgtatgaaaatgcactgttatca
ttgcgtgatgaaaacgatatagaagttaccttgaggcagtttgagtttgcattgcttgat
gaaatgggtctgttgcccgatttcacaacggacgtggaatacgagatgccgatagtggag
agcggaagctaccattttcagatggatgctggatttattagattgccagaggatgcggca
ggcgcaagaggaatgcgggggttacctggccaagccttgctcagtttgtcgcagggcgaa
tttaccccccttagtaaaaaggttgcaaaagtactttgtcgcgatttacttaaaccgctt
attggtgacaagccgctgaaaagtcgtgaactctttatgtcaaagccacgctga
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