Alteromonas sp. Mex14: BM527_03405
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Entry
BM527_03405 CDS
T10272
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
altm Alteromonas sp. Mex14
Pathway
altm02020
Two-component system
altm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BM527_03405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BM527_03405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
altm03021
]
BM527_03405
Transcription machinery [BR:
altm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BM527_03405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
APD85212
LinkDB
All DBs
Position
complement(779067..780548)
Genome browser
AA seq
493 aa
AA seq
DB search
MKPSLQLKFSQQLTMTPQLQQAIKLLQLSTLDLQQEIQEALDSNPLLEVEEGNDEPQLEK
NNLDNDDGASEASATASSDTLEAGDALEKNDLPDELPIDSTWDEYYSASSAPAPGPSSDD
EQIFQGETTDDIQEHLSWQMRLTHFSETDRAIATAIIDSIDESGYLTVSLEEILDAVNDD
DLEEPIEMDEVECVLKRIQMFDPIGSGSRTPQECLMVQLRQFSDDTPWLAEAKQLIEEYS
DLLSSKDYRTLMRKSRLKEDQLREAMRLLQTLNPRPGSALVTKEPEYVIPDVSVAKKNGR
WVVELNPDSLPKLSVNQQYAAMSRRAKNSSDSQFIRSHMQEAKWFIKSLESRNETLMKVA
NCIVQQQMGFFEHGPEMMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRGIFELKYFFS
SHVATESGGECSSTAIRALIKKLVAAENVSKPLSDSKIASLLAEQGIKVARRTIAKYRES
LSIPPSNQRKSLI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatctttacagctaaaatttagccaacaacttaccatgacacctcagcttcag
caggctattaaactgctgcagctttctactcttgatcttcaacaggagattcaagaggcg
cttgactctaaccctctgttagaagttgaggaaggtaatgacgagcctcaattagaaaag
aataatctcgataatgatgatggagcatcagaagcgtctgctactgcatcaagcgacacc
ttggaagccggtgatgcgttagaaaaaaacgatctccctgacgagttgcctatcgacagt
acatgggatgaatattattccgcgtcttcagcgcccgcgcctggtccatcaagtgatgat
gaacagatattccagggcgaaactactgacgatattcaagaacatctttcttggcagatg
cgcctgacccatttttcggaaactgaccgggcaattgcaacggcgattatcgactcgatt
gatgaatctggctatctaaccgtctcccttgaagaaattcttgatgcggtgaacgatgat
gacttggaagagcctatagagatggacgaagtagaatgcgttttaaagcgcattcaaatg
ttcgaccccattggttctggttcacggacacctcaagagtgtttaatggttcagcttcgc
caattttcagacgatacgccgtggctcgctgaggcgaagcaactaatagaagagtactct
gaccttcttagcagcaaagactaccgtacgttaatgcgtaagagtcgcctgaaggaagat
cagctgcgtgaggctatgcgtttattacaaaccttgaatcctcgcccaggtagtgcttta
gttactaaagagcctgaatatgttattcctgatgtttcagtcgccaaaaagaatggtcgt
tgggtggtagaattaaaccccgacagcctgcctaaattaagcgtgaatcaacagtacgct
gcgatgagtcgtcgtgcaaagaacagtagcgactctcaattcatccgctcacacatgcaa
gaagccaagtggttcataaaaagcctagagtcacgcaatgaaaccctgatgaaggtagcg
aattgcattgtgcagcagcagatgggctttttcgagcacggcccggaaatgatgaaacca
atggtgttaaatgatgtcgcagaaatggtagatatgcacgaatcgactatttctcgtgtg
acgacgcaaaaatacatgcacacaccacgtggtatttttgaactgaagtacttcttttca
agtcacgttgcgacagagtctggtggtgagtgttcatccaccgctattcgagcattgatc
aagaagctggtggccgctgaaaatgttagcaagccgctaagtgatagcaagattgcttca
ttgttggccgagcaaggcataaaagtcgctcggcggacaatagcaaaataccgggaatcg
ttatcgatcccgccgtcgaaccaacgcaaaagccttatctaa
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