Alteromonas sp. Mex14: BM527_04890
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Entry
BM527_04890 CDS
T10272
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
altm Alteromonas sp. Mex14
Pathway
altm02020
Two-component system
altm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BM527_04890
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BM527_04890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
altm03000
]
BM527_04890
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
altm02035
]
BM527_04890
Transcription factors [BR:
altm03000
]
Prokaryotic type
Helix-turn-helix
Other families
BM527_04890
Bacterial motility proteins [BR:
altm02035
]
Flagellar system
Flagellar assembly proteins
Others
BM527_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
AAA_7
AAA
Asp_Glu_race
bpMoxR
AAA_19
AAA_2
Motif
Other DBs
NCBI-ProteinID:
APD85473
LinkDB
All DBs
Position
1143062..1144525
Genome browser
AA seq
487 aa
AA seq
DB search
MKNILLVSDNQELIQNLETIVTFMGESCQSRGFSECERYLLDSGADAVLIEHVSSTIVSN
LVEKFPHIPFVALVENNSQATAAHNLVSVIATPLTYPVLTQAIHRCQEYSRRKPSLSRTA
GTKTRLFRSLIGKSEQIQIVRRLVEQVAPTDATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERTYERVGGNKPLQCNVRIIAATHRNLETMISEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVEAVRFTEQAIASLMEHDWAGNVRELSNLVERLTILY
PGQIVDIADLPEKYQYGDVQAYEPDYPEEILEREAFNELFAEAAAQEPEEDINQSNNQSF
NSLVSSELPEEGVNLKEYLSELEVNLIRQALDNQEWVVARAADKLGMRRTTLVEKMRKYD
IQRTEDA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacattttgctggttagtgacaaccaggaacttattcaaaacttagaaactatc
gttacgttcatgggagagtcgtgtcaatcacgaggctttagtgagtgtgaacgctatttg
ctagatagcggtgctgacgctgttcttattgaacatgtctcttcaaccatcgtaagcaac
ttggttgagaagtttccacacataccttttgttgcactggttgaaaataacagtcaagcg
acagcggctcataatttagttagcgttatagcaaccccattaacgtaccccgttttaact
caggctattcatcgctgccaagaatattctagacgtaaacccagcttgtctcgcaccgcg
ggtacaaaaacgcgattgtttagaagccttatcggcaaaagcgagcaaattcaaattgtt
cgccggttagtagagcaagttgcccctactgatgccacagtattgatcctaggtgaatct
ggtacgggtaaggaagtcgttgcccgtaacgtacactttttatcagagcgtaaagatggt
cctttcatacctgttaattgcggcgctattcctggtgaattgttagaaagtgaattgttt
ggtcatgagaaaggggccttcacaggcgcgatcagcgcgcgaaaagggcgcttcgaatta
gcggaaggtggtacgctatttcttgatgaaattggcgatatgccccttcaaatgcaggtg
aaattgctgcgtgttcttcaagaacgcacgtacgaacgggtagggggaaacaagcctctg
cagtgcaacgttcgcataatcgcggcgacccaccgcaatttggaaaccatgatcagtgaa
gataagtttcgcgaggacttgtactatcgcctcaatgttttcccaattgacagcccagcc
ttaaggcaaagaaaagacgatattcccctattactacaagagttgaacagtcgcattcag
ggcgatggcgttgaggctgtgcgttttactgagcaagccattgcgtctctgatggagcat
gactgggctggtaacgttcgagagctatcgaatttagtagagcgactaacaattctctat
cccggacaaattgtggacatcgctgatttgcctgaaaaatatcagtatggtgatgtgcaa
gcttacgaacctgactatcccgaagagattcttgagcgtgaggcatttaacgagttgttt
gctgaagcggctgcacaagagcctgaagaggacatcaaccagtcaaataatcaaagtttt
aatagcctggtttcttctgaattacctgaggaaggcgttaatctcaaagagtatctttct
gagcttgaagtgaaccttatacggcaagccctagacaaccaagagtgggtagtagcgcga
gctgccgacaaacttggaatgcggcgcacaacccttgttgaaaaaatgcggaagtacgat
attcaacgcaccgaagatgcgtaa
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