Alteromonas sp. Mex14: BM527_08380
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Entry
BM527_08380 CDS
T10272
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
altm Alteromonas sp. Mex14
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
altm03016
]
BM527_08380
Enzymes [BR:
altm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BM527_08380
Transfer RNA biogenesis [BR:
altm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BM527_08380
Prokaryotic type
BM527_08380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
APD86099
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All DBs
Position
1972427..1973398
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AA seq
323 aa
AA seq
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MARRRKGREINGIVLLDKPLGGSSNQLLQKVRWLYKAAKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAQLGVRTTTSDADGELVEEKPVDVSEEQVRDACLAFLGKSKQ
IPSMFSALKHQGKPLYHYARQGIEIEREPRDIEVYELDVLRIELPFVEMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDKLIEIQESLEEGDFNALDDLLIPM
DTAVSRLPFVTINDAERNRFDNGQSVKGECSEALCEGTAYRVYHGDDTSGIFLGVGEGVL
DPKDQGIPKQEIFVNPKRRVVYS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtaaaggccgtgagattaacggcatagtattgcttgataaaccgctt
ggtgggtcatctaatcaactgcttcaaaaagtgcgctggctgtacaaagcggcaaaagcc
gggcatacaggcgcactcgatccacttgccagtggcatgttgccgttgtgcttaggtgag
gccactaagttttctcagtttcttctggatgctgagaaaacctacgaagtaacggctcaa
ctgggcgtgcgcacaactacatctgatgcagacggtgaattggttgaagaaaagcctgtt
gatgtgagcgaagagcaagtgcgcgatgcgtgcttggcatttcttggtaagagcaaacaa
atcccgtccatgttttcagcgcttaaacatcaaggtaaaccgctctatcactatgcccgt
caaggtatagaaatcgagcgtgaaccccgggatattgaagtgtacgaattagatgtactg
cgcattgaactgccgtttgtagaaatgcgcattaagtgcagcaaaggcacttatattcgc
tccatcgtagatgatttaggtcagaaccttggctgtggtgcttacgtgactcgtttacat
cgcacggaagtagcagactatcctacggataaaatggtatcgcttgataagttgattgaa
attcaggaatcactggaagaaggtgactttaacgcgcttgatgacttattgattcctatg
gataccgctgtaagtcggttgccatttgttacgattaacgacgctgaaagaaaccgtttt
gataacggccaatctgtaaaaggcgagtgcagcgaagctctttgtgaaggcacagcttat
cgcgtttaccatggcgacgataccagtggtattttcttaggcgtaggagaaggggttctt
gacccgaaagaccaaggtatccctaaacaagaaatatttgttaaccctaagcgtcgagtt
gtttacagctaa
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