Alteromonas sp. Mex14: BM527_08985
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Entry
BM527_08985 CDS
T10272
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM527_08985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altm03019
]
BM527_08985
03016 Transfer RNA biogenesis [BR:
altm03016
]
BM527_08985
Enzymes [BR:
altm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BM527_08985
Messenger RNA biogenesis [BR:
altm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BM527_08985
Transfer RNA biogenesis [BR:
altm03016
]
Prokaryotic type
tRNA degradation factors
BM527_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
APD86208
LinkDB
All DBs
Position
2115874..2117985
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AA seq
703 aa
AA seq
DB search
MTPITKSFQYGQHTVTLETGVIARQATAAVLASMDDTSVLVTVVGKKEAKPDQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFKNEVQVVVTVMSAN
PDIPTDIISMIGTSAALAISGIPFNGPIGAARVGYSNGEYILNTRAEEQAESQLDLVVAG
TEGAVLMVESEADVLSEDTMLGAVMFGHEQLQTVVKAVNEFAAEVGTEKWDWAPEAENTA
LKDKVKALAEAEMTAAYQISDKLERKDAVTAATDKALEAILAEDEEQDKKEVLDLLHDLE
SDVVRSRILSGAPRIDGREPAMIRALDVATGILPRTHGSALFTRGETQAIVAATLGTERD
AQMIDELQGKRDSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSEEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDDNFVVLSDI
LGDEDHLGDMDFKVAGTTDGITALQMDIKIEGITKEIMQIALKQAKEARLHILKVMDEAI
GGHREELSEFAPRIYTMKIDQDKIRDVIGKGGAMIRQITEESDTNIEIEDDGTIKIFATE
RAKADIAISKIEQVTAEIEVGKTYNGKITRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLKEGEMVDVKVMEIDRQNRVRLSIKELLEKPAPKSDDAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaatcatttcagtatggacagcatactgtaactctagagacgggt
gtaattgctcgtcaggcaacagctgcggttcttgcgagcatggacgatacgtctgtactg
gtaacagtagttggtaaaaaagaagccaagccagatcaagacttcttccctctaacagtt
aactaccaagaaaaagcatacgctgcgggtaaaatcccaggtggtttcttcaagcgtgaa
ggccgtccatctgaaggcgaaacattgactgcgcgtcttatcgaccgcccaattcgccca
ttattcccagaaggtttcaaaaacgaagtacaggttgttgttactgtaatgtctgctaat
ccagatattcctacagacatcatctctatgattggtacttcagcagctcttgctatctct
ggtattcctttcaacggcccaattggtgcggctcgtgtaggttatagcaacggcgaatac
attctaaacacacgcgcagaagagcaagctgaaagccagcttgaccttgttgttgcgggt
actgaaggtgcagtacttatggttgaatcagaagctgacgtgctttctgaagacactatg
ctaggtgcggtaatgttcggtcacgagcaacttcaaactgtggttaaagcagtgaacgaa
tttgctgctgaagttggcactgagaagtgggactgggcaccagaagcagaaaacactgcg
cttaaagacaaagttaaagcactagctgaagcagaaatgactgcggcttaccagatttct
gacaagttagagcgtaaagacgcagtaactgcagctactgacaaagcactagaagctatc
cttgctgaagacgaagagcaagacaagaaagaagtgctagaccttcttcacgatcttgag
tctgacgtagtacgttcacgcatcctttctggcgcgccacgtatcgacggtcgtgagcct
gcaatgattcgtgcactagacgtagcaacaggtattcttcctcgtactcacggttctgca
ctatttacccgtggtgaaacacaggcaattgttgctgctactttaggtacagagcgtgac
gcacagatgattgacgagcttcaaggtaagcgcgacagccgtttcatgcttcactacaac
ttccctccatactgtgttggtgaaactggtatgattggttcgcctaagcgtcgtgaaatt
ggtcacggtcgtctagcgaagcgtggtattcaagcagtaatgccaagtgaagaagaattc
ccgtatgtagtacgtgtggtttctgaaatcacagaatcaaacggttcatcttcaatggcg
tcggtatgtggtacttcactagcgcttatggatgcaggtgttccaattaaagcgtctgtt
gcgggtatcgcaatgggcctagttaagagtgacgacaactttgttgtactttcagacatc
cttggtgacgaagatcaccttggcgacatggactttaaagtagcgggtactaccgacggt
attactgcacttcaaatggacattaagattgaaggtattactaaagaaatcatgcaaatt
gcgcttaaacaagcaaaagaagcacgtttgcacattcttaaagtaatggacgaagcgatt
ggcggtcaccgtgaagagctaagtgaatttgctccacgcatttacacaatgaagattgac
caagacaagatccgtgacgttatcggtaaaggcggcgcaatgatccgtcaaattactgaa
gagtctgacactaacatcgagattgaagacgacggtactatcaaaatcttcgcgacagag
cgtgcgaaagcagacatcgctattagcaagattgagcaagtaacggctgaaattgaagtt
ggtaagacttacaacggtaagattacacgtattgtagacttcggtgcgtttgtagaagta
cttccaggtaaagaaggtcttgttcacatttcacaaatcgctcacgagcgtgtgaacaag
gttactgactaccttaaagaaggtgaaatggttgacgttaaggttatggaaatcgaccgc
cagaaccgtgtacgtttaagcattaaagagcttctagaaaaacctgcgcctaagtctgac
gacgcagagtaa
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