Alteromonas sp. Mex14: BM527_09505
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Entry
BM527_09505 CDS
T10272
Name
(GenBank) DNA polymerase III
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BM527_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_09505
Enzymes [BR:
altm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BM527_09505
DNA repair and recombination proteins [BR:
altm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BM527_09505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
Motif
Other DBs
NCBI-ProteinID:
APD86301
LinkDB
All DBs
Position
complement(2235695..2236489)
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AA seq
264 aa
AA seq
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MKTIAITSVPGFDEWREASRECLAHGIPPEAIIWQNVQSVQDDLFGHQEQTQATNKLQIK
HTIPKSALVLFKYALCHSDTKRFALCYRVLWRIIYENRNLIQLKTDEDIIQLYMLVKAVK
RDAYKMSAFLRFKELEVEGKEHFVAWYEPEHYSLEVKLDFFRTRFKNMRWSILTPYRGAH
WDTETLLLEDNPDPSAVPDDDRIEKYWLTYYANIFNPARIKTNAMLNQMPRKYWKNMPET
SLIDDMIKQSGARAYKMIIDGNKH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgattgcaattacatcggtgcctgggtttgatgaatggcgcgaagcatcaagg
gagtgtctagcacacggtattcctcctgaggctattatctggcaaaacgttcagtcggta
caggacgacctgtttggtcatcaagagcagacccaagctactaacaaacttcaaataaag
cacacaattcccaaatctgctttagtgctatttaagtatgcgctatgtcatagtgatacc
aaacgctttgctttgtgttatcgcgttttgtggcggataatttatgaaaatagaaacctt
attcagctaaaaactgatgaagacataatacaactctatatgcttgtaaaagccgtcaaa
cgcgacgcgtataaaatgagtgcgtttctgaggttcaaggaactggaagtggagggtaaa
gaacattttgtcgcgtggtacgagccagaacattacagtttggaggttaagctcgacttc
tttcgaactcgttttaaaaacatgcgctggtctatccttactccctaccgtggcgctcat
tgggataccgaaacgcttcttcttgaggataatccagatccaagtgcagttcctgatgat
gaccgtatcgaaaaatactggcttacttattatgcaaacatatttaacccggcgcgcatt
aagacgaatgcgatgcttaatcaaatgcccaggaaatattggaaaaacatgcctgaaacc
tcgttgatagacgacatgattaagcagtcgggtgcccgtgcgtataaaatgattattgat
ggaaataagcactaa
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