Alteromonas sp. Mex14: BM527_09765
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Entry
BM527_09765 CDS
T10272
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
altm Alteromonas sp. Mex14
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_09765
Enzymes [BR:
altm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BM527_09765
DNA repair and recombination proteins [BR:
altm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BM527_09765
Prokaryotic type
BM527_09765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APD86350
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Position
2305683..2307107
Genome browser
AA seq
474 aa
AA seq
DB search
MTVPTSIMWFRQDLRVKDNPALNAACDMGKIVPIYIYDDNAPDGRLPGGASQWWLHHSLE
SLNKRLNGHLQIFKGDPQTIIPGLMKTFDATSIFWNRCYEPWQINRDKALKKHLIDEGFE
AHSCNGSLLWEPMKVLKKDGTPYRVFTPYYKNGCLQVEEPRYPKAPPARITYADVKSEGD
QLASLALLPSIKWDETIAEEWSPGEDGAADNLSDFIENSARKYKDGRDIPSARGTSRLSP
HLHFGEVSPNQVWYAIKDKFGNSEDKSIETYLSELGWREFSYYLLFHFPTLPNKNFNDKF
DKFPWRTDAKALKAWQQGKTGIPIVDAGMRELWQTGYMHNRIRMVVGSFLVKNLLLDWHE
GERWFWDTLLDADLASNSAGWQWVAGSGADAAPYFRVFNPVLQGEKFDKKGTYVRKYCPE
LNGLSDKYIHKPWEAPSAILKDAGIELGKHYPKPIVDLKASRQRALDAFQEIKE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttcctacaagcatcatgtggttccgacaagaccttcgcgtaaaagataacccc
gcgttaaatgcagcctgtgatatgggcaaaatcgttcctatttatatctatgatgacaat
gcgcctgacggtaggcttcctggcggtgcaagccagtggtggcttcatcattcacttgag
tcgttaaacaagcgactaaacggtcacttacagatctttaaaggcgacccgcaaactatt
attcctgggttaatgaagacgtttgacgcgacctctattttttggaaccgctgttacgag
ccatggcagataaaccgtgataaagcactcaaaaagcatcttatcgacgagggatttgaa
gcacatagctgtaatggtagtttattgtgggaacctatgaaggtactgaaaaaagacggt
actccgtatcgcgttttcactccctattacaaaaatggctgtttacaagttgaagaaccg
cgctaccccaaagcacctccagcacgaattacctacgctgacgtgaaaagtgaaggtgat
caattagcatcattggcattattgcctagcatcaagtgggatgagactatcgctgaagaa
tggtcaccaggagaagatggcgccgctgacaacttatctgattttatcgagaactctgct
agaaaatataaagatggtcgcgacattccatctgcacgcggcacgtcacgcctatctccg
catctacattttggtgaagtatcgcccaatcaagtttggtatgccattaaagataagttt
ggtaatagtgaagataaaagtatcgaaacttatttaagcgaattgggttggcgtgagttc
agctactatctactgtttcactttcctacgcttccaaataaaaacttcaacgataagttc
gataagtttccttggcgcactgatgctaaagcactaaaagcatggcaacaaggaaagacg
ggtatacctatcgtcgatgcaggcatgagagagttatggcaaacgggctatatgcataat
cgtatacgcatggttgttgggtcatttttggtgaaaaacttactgcttgactggcacgaa
ggtgaacgctggttttgggataccttgttagatgctgatttagcgagcaacagtgcggga
tggcaatgggtagctggctctggagcggacgctgcaccttacttcagagtatttaaccct
gtgttacaaggtgaaaaattcgataaaaagggcacctatgtgcgtaaatattgccctgag
cttaatggtttatcagataaatatattcataaaccttgggaagcaccttcagccattttg
aaagacgcgggaattgaattaggcaagcattatccgaaacccattgtcgatttaaaagca
tctcgccagcgtgccttagatgcgtttcaggaaataaaagagtag
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