Alteromonas sp. Mex14: BM527_10925
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Entry
BM527_10925 CDS
T10272
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BM527_10925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_10925
Enzymes [BR:
altm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BM527_10925
DNA repair and recombination proteins [BR:
altm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BM527_10925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SLFN-g3_helicase
SH3_13
ResIII
UvrD_C
DEAD
PhoH
RecD_N
nSTAND3
AAA_16
NPHP3_N
CSDE1
TrwB_AAD_bind
Terminase_6N
KH_FAR1_2nd
AAA_5
AAA_12
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
APD86554
LinkDB
All DBs
Position
complement(2554354..2556504)
Genome browser
AA seq
716 aa
AA seq
DB search
MNNYQQSVSPFFDNLFGIEAIDKFVAKEFGFVEPLSESDALIWAGLLVHLSYMQRNGHSC
VYLKDVAGTTLFKELAPSAASSIAEQPSGDVFQSDEMHASAREEEKALKTGFVLPELPPL
LKIVKSALKNEQVAQLFVYDNGKLYSRRYYEFEQEVARNVVKRAALEPLTEEASEKVKQL
WPAIFPTQTTENQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQASNENLKIV
LAAPTGKAQQRMTESIISSVEGLRGKVDDSALDKVPTDAVTLHRLLGLREFGVSTKYNQY
NQLTADVLIVDEVSMVDLALMTRIVRALPEHARLYLIGDADQLPAVELGNVLEQLVSDEA
VVFDKGDNAVSSSASTLDDALSMGGVPSLMRQSIATLCPHLPLLPVNEEAKTYVATLQAP
QRFKGQVAKVATAIQRGDANEAITAIGEHDSGDEKTKITSNALLGLKAGVHLLPEQQVNT
RDLQKLAKESFLPIFNAKSAEDALSCLNYVRWLTPVRKGVMGVEGLNSLVFDAIKHKIKK
REGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSKGKLYAWFYQDTKNEGEVPSADNKQS
VNVSHGQQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNHVVLILPKPDSEKAANLFHR
GLVYTGLTRSKDGCLIIADNNTFTGMVAKVDKRYSGLSEAIKRITAKEQDLVLEDD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactatcaacaatccgtgtcgccgtttttcgataatttatttggcattgaagcc
atcgataagttcgtcgcaaaagagtttggctttgtagaaccgctgtctgaaagcgatgct
ttaatatgggcaggtttattggtacacctatcgtacatgcagcgaaatggccatagctgt
gtttatttaaaagatgttgcgggaacgacgctctttaaagagttagcaccttcggcggca
agtagtattgctgagcaaccatctggcgacgtatttcagtcagacgaaatgcatgcaagc
gcacgagaagaagaaaaagcgcttaaaacaggctttgtgttaccagaattaccgccttta
cttaaaattgtgaaaagtgcgcttaaaaacgagcaggttgctcagctgttcgtctatgac
aatggcaaactttacagccgtcgctactatgagtttgaacaagaggtagcgagaaacgtt
gtgaagcgagcagcgcttgagccgctaactgaagaggctagcgaaaaagttaagcagctt
tggcctgccatattccccacacagaccacagagaatcaagactggcagcaaatcgccgtt
gctaagagtttgatgcagcgcttttgcgtgataaacggtgggccgggaacggggaaaact
tataccgtgttgcgcttattactcgcgctccaggcaagtaatgagaacttaaaaattgta
ctggcagcccctacaggtaaagcgcagcagcgcatgactgagtctattataagcagtgta
gaaggacttcgcggcaaggttgacgatagtgcccttgataaagtgcctaccgatgccgta
accctgcacagattgctagggcttcgcgaattcggcgtttcaacaaagtacaaccagtat
aaccaattgactgctgatgtactcatagtagatgaggtaagtatggtcgatttagcgtta
atgacccgtatagttagggcattgccagagcatgctcggctttatcttattggcgacgcc
gatcagttgcctgcggtggagcttggcaacgtgctagaacaacttgttagtgacgaagca
gtggtttttgacaagggcgataatgctgtatcaagtagcgcaagtactcttgatgacgcg
ctttcaatgggaggcgtgccttctttaatgcgacagagtatcgcaacgctttgcccacat
ctccccttgttgcctgtaaatgaggaagccaaaacttatgtggcgacacttcaagcaccg
cagcgcttcaaggggcaggtggcgaaggtggcgacggccattcagcgtggcgatgctaat
gaagcaattaccgccattggtgaacatgatagtggcgatgaaaagacaaaaattacgtca
aatgcactgttaggcttgaaagctggcgttcatctattgccagaacaacaagtaaatact
cgagatttacagaagcttgcaaaagaaagcttcttgccaatatttaatgcgaaaagcgct
gaagacgcgcttagttgcctgaattatgtccgatggctcacaccagtacgaaagggtgtg
atgggtgttgaaggtttgaacagtcttgtattcgacgccattaagcacaaaattaaaaag
cgagaagggcacttctaccaaggccagccgataatgatagtaaaaaatcatcatcctcag
cgactttcaaatggcgaagttggcgtaatttggccagacagcaagggtaaactttatgct
tggttttaccaagatacaaaaaatgaaggcgaagttccaagtgcagataacaaacaaagc
gtaaatgtgagtcacgggcagcaaaaacaagcgcttcgcagcatatcactgtcaagagtt
ccgcagttcgaaaccgtatatgcaatgactattcataaatcccagggctctgaattcaac
catgtagtactgattttaccgaagcctgacagcgaaaaagccgctaacctttttcatcga
ggtttggtctacaccgggttaacccgttcaaaagatggttgcttaatcatagctgataac
aacacgtttactggtatggttgcgaaggttgacaagcgttattctgggttgtcagaagcg
ataaaacgaatcactgccaaagagcaggacctcgtgctagaagacgattag
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