Alteromonas sp. Mex14: BM527_11115
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Entry
BM527_11115 CDS
T10272
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
altm Alteromonas sp. Mex14
Pathway
altm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BM527_11115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altm03400
]
BM527_11115
Enzymes [BR:
altm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BM527_11115
DNA repair and recombination proteins [BR:
altm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BM527_11115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
HHH_RecD2
SH3_13
Herpes_Helicase
AAA_11
SLFN-g3_helicase
AAA_22
NTPase_1
nSTAND3
T2SSE
nSTAND_NTPase5
HerA_C
AAA_7
AAA_16
TraI_hel_assoc_N
UvrD-helicase
AAA_14
AAA_29
AAA_28
HHH_5
NAT10_TcmA_helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
APD86590
LinkDB
All DBs
Position
complement(2602356..2604455)
Genome browser
AA seq
699 aa
AA seq
DB search
MIFVSTHPNNLGGMEPAVGQYWKICGSCSKSTQTYNKYTRHVLIVDASKADCIVPVKHEA
LIQFISQCKDFAGISVGKARKLIKAFPNDPYQAVLDNDAKTISRVSNLTPKAAVRLKRGF
RKYQNMKYAKWLSDYAVPLSIISRIIEYHDFKTIDLITENPWRLMDFGMSFTDASAIARR
ILNVDSGEVSEEQFKTDPRRIIAATEDVMQIIARRGHTVATYRQITNYLSKKHFERALAE
AAIELAVRFKKLICVADNLYQLTGTYMHEAVIAKRLLKLTIIEQWGAAEDAAFKKALYAN
HFELTNNQRLATQRSAMHGVSVITGGAGTGKTTVLQTVLRTYSNLGYTTHGVAVAGRAAM
RMHESTGCNSCTIAKYLRTEPPKHGDKYVLVIDEASMLDVQTTFAVLTHIPDTARIIFVG
DVQQLPSIGAGRVFADIINSKKVPVTVLDVVKRQDDTTGIPSYSKSIINGEVPEYLTQGN
ITFHDVNIEAIERTADELLTINNDETQIIGMTRKGAENRAGIEQINRNAQANVNQNGTRL
TVSANGQHQFMRIRENDRVIFTRNNYDKGVWNGTLGVVKNVNCHDDVYAHVSTDDGDIIE
ITHSVLFDIQLSYAITLHKAQGSQFKRVIIVLTNKSMLDRSWLYTAITRAEYSVDIVGPK
ELLLQAIRTKSKETQRQTRLKSLIEGNFVLLKPQEHNSI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgatttttgttagtacgcaccccaacaaccttggtggtatggagccagctgtgggacag
tactggaaaatctgcggttcgtgcagtaaatcaactcagacgtataataaatacactcgc
catgtattgattgttgatgcttcaaaggcagattgcatcgttccggtcaaacatgaagcc
ctgatccaattcatttcacagtgtaaagatttcgcaggtataagcgtggggaaagcaaga
aagctaattaaagccttcccaaacgacccgtatcaggccgtattagataatgatgcaaaa
actatctcgagagtatcgaatttaactcccaaggcagctgtgcgactcaaaagaggcttt
agaaagtatcagaacatgaagtacgctaagtggctcagtgattacgccgttccattatca
attatctctcgcattattgagtatcacgatttcaaaacgattgatttgattacagaaaat
ccgtggcgacttatggactttggcatgtctttcactgacgctagtgctatagctagacgc
atattaaacgtggattccggagaggtaagcgaggagcagttcaagacagatccgagacgg
atcatcgcagctacagaagatgttatgcaaattattgcaaggcgaggtcatacagttgca
acatatcggcagattactaactatttaagtaaaaagcactttgaaagggctctcgctgaa
gctgctattgagcttgctgttcgctttaaaaagcttatctgtgttgcagataacttatac
caacttactggcacctacatgcatgaagcggtgatcgcaaagcgattgcttaaactaact
ataattgagcagtggggggccgctgaagatgctgcttttaaaaaggcgctgtatgccaat
catttcgaattaactaacaaccagaggctcgcaacacagcgctcagccatgcatggtgta
tctgttataacaggcggcgcgggtactggcaaaacaaccgtcttacaaacggttttgcgc
acttattcaaatctcggctataccactcatggggtcgctgttgcaggccgtgctgcaatg
cgtatgcacgagagtacaggctgtaattcatgtacgatagccaagtacttgcgcacagaa
cctcccaaacacggtgataaatatgtcttggtcatcgacgaagcctccatgcttgatgtt
caaaccacatttgcagttttgactcacatacctgatacggctcggattatatttgtaggt
gatgttcagcaactacccagcattggtgcgggtcgggtatttgcggacatcattaatagc
aaaaaagtccctgttactgttctagatgtagtaaaacgccaagatgacactacgggtatt
ccttcttattcgaagtccatcatcaatggtgaagtgccagagtatttaactcaaggtaat
atcacatttcatgatgtaaacattgaagcaatcgagcgcaccgctgatgagcttttaacc
ataaataatgatgaaacgcagatcatcggcatgactaggaagggggcggagaaccgtgct
ggtatagaacagattaaccgcaatgctcaggcaaacgttaatcaaaacggcacaagatta
actgtgagcgctaatggtcagcaccaatttatgagaattagagagaatgatcgcgtaatt
tttacgcgtaataattatgacaagggagtttggaatgggacactaggcgtagtaaaaaac
gttaattgtcatgatgatgtatatgcacatgtatccacagatgatggtgatattattgaa
atcactcacagtgtgctgttcgatattcaacttagctacgcgattacactgcacaaagcg
caaggctcgcaatttaagcgggtcattattgtattgacgaataaaagcatgttagaccga
agttggctttatactgcaatcacccgcgccgaatacagtgttgatatcgtaggccccaaa
gaattactgctacaagccattagaacaaaaagcaaagaaactcaacgacagactcgccta
aaatcgttgattgaaggaaattttgtacttttgaaaccgcaagaacataattcgatttga
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