KEGG   Altererythrobacter sp. N1: LBX01_01260
Entry
LBX01_01260       CDS       T10199                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
altn  Altererythrobacter sp. N1
Pathway
altn03020  RNA polymerase
Brite
Enzymes [BR:altn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LBX01_01260 (rpoC)
Transcription machinery [BR:altn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LBX01_01260 (rpoC)
DNA repair and recombination proteins [BR:altn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LBX01_01260 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: UBS33287
LinkDB
Position
complement(258035..262369)
AA seq 1444 aa
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYIVTEPGLTPLEKFQLLTEDELLEAQDEYGEDSFSAG
IGAEAVKFMLMDLDLERERDDLLEELATTKSKLKPAKIIKRLKVVESFIDSGNRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMDREGEPGEGMLLADMAEVHQALEV
GAVTLHSKITSRVPQTDEAGKQYMKRVDTTPGRMLIGECLPKNHKVPYEVINRLLTKKDI
GDVIDEVYRHTGQKDTVLFADAIMSLGFRHAFRAGISFGKDDMIIPDSKVELVDQTKALV
ADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVADAMMDEIRARPRDADGREAQINSIYMM
SHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVIVETDCKTQNALEMRAIVQGGSVIASLGERILGRTVA
EDIVNAATGEVIAKAGTLLDEPMVKAIEEAEVQVAKIRSPLICEAEQGVCATCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLESISDGKIEYRDMPTI
IDKRGKILSMARNGELAVVDAEGREREIHKVPYGTVLMFKDGDAVKEGDRLAEWDPFTLP
IITEQSGTVRYQDLIDGTTMEERVDETTGIAQRVVTELRASGRKKKEDLRPRLTLLGEGQ
TDDGETEAQRYMLAPGTTLSVEDGQQVEAGDILARASREAAKTRDITGGLPRVAELFEAR
IPKDNAVIAKISGKIEFVREYKAKRKIAIVPEEGEAVEYLIPKTKVIDVQEGDFVKKGDT
LISGSPNPHDILEVMGVEALAEYLVNEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDG
GDTVLLPGEQVDLEEMNEANAKLGKGKQPATGTPILLGITKASLQTRSFISAASFQETTR
VLTQAAVEGKRDSLIGLKENVIVGRLIPAGTGAGMNRMRVTASSRDAALRAQWKKAQEAI
IAANSAAEERAAEALRDPLDDTGNDPLAAVEGETHGTDADAGEYLQTAEDTAAEDTASED
KAED
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgaacgaactgaccaaattcaccaaccagctggccaagccggaaaccttcgaccagatc
cagatcggcatcgcatcgcccgaacgcatccgttcgtggtcgttcggtgaaatcaagaag
cccgaaacgatcaactaccgcacgttcaagcctgagcgtgacggcctgttctgcgcgcgc
atcttcggcccggtgaaggactacgaatgcctgtgcggcaagtacaagcgcatgaagtac
aagggcgtcgtctgcgaaaagtgcggcgtcgaagtgaccgtgaccaaggtccgccgcgaa
cgcatgggccacatcgaactggccgcgccggtcgcgcacatctggttcctcaagtcgctg
ccttcgcgcatcggcctgctgctcgacatgcagctcaagcagcttgagcgggtgctgtat
ttcgaaagctacatcgtcaccgaaccgggcctgaccccgctggaaaaattccagctcctg
accgaagacgaactgctcgaagcgcaggacgaatacggcgaagacagctttagcgccggg
atcggggccgaagcggtcaagttcatgctgatggacctcgatcttgagcgtgagcgtgac
gatctgctggaagagctggcgaccaccaagtccaagctcaagcctgccaagatcatcaag
cgtctgaaggtcgtggaaagctttatcgattcgggcaaccgccccgaatggatgatcctt
gaagtgatcccggtcatcccgcccgaactgcgcccgctggtgccgctggatggggggcgg
ttcgcgacgtcggacctcaacgatctctatcgccgcgtcatcaaccgtaacaaccgcctc
aagcgcctgatcgaactgcgcgcgccggacattattgtccgcaacgaaaaacgcatgttg
caggaagccgttgacgcactgttcgacaacggccgccgtggccgcgtgatcaccggggcg
aacaagcgtccgctgaaatcgctgtccgacatgctcaagggcaaacagggccgcttccgt
cagaacctgctgggtaagcgcgtcgactattcgggccgttcggttatcgtgaccgggccg
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgaactgttcaagccg
ttcatctacgcccgcctcgatgccaagggtctgtcgatgactctgaagcaggcgaagaaa
tgggtcgagaaggaacgcaaggaagtctgggacatcctcgacgaagtgatccgtgaacac
ccggttatgctgaaccgcgcacccacgcttcaccgtcttggcattcaggcgttcgaaccc
gtgctgatcgaaggtaaggcgatccagcttcacccgctggtctgctcggccttcaatgcc
gacttcgatggtgaccagatggcggttcacgtaccgctttcactggaagcgcaactcgaa
gcgcgtgtgttgatgatgtccaccaacaacatcctcagccccgcgaacggcaagccgatc
atcgttccgtcgcaggatatggtgctgggtctgtattacctgtcgatggaccgcgaaggc
gagccgggcgaaggcatgctgctggccgatatggccgaagtgcatcaggcactggaagtg
ggcgcggtgacgctccactccaagatcaccagccgcgttccgcagaccgacgaagcgggc
aagcagtatatgaagcgggtggataccactccgggccgtatgctgatcggtgaatgtctg
ccgaagaaccacaaggttccttacgaagtcatcaaccgcctgctgaccaagaaagacatc
ggcgacgtgatcgacgaagtctatcgccacaccggccagaaggacaccgtgctgtttgcc
gacgcgatcatgtcgctcggtttccgccacgcgttccgtgcgggcatttcgttcggcaag
gacgatatgattatcccggattcgaaggtcgaactggtcgatcagaccaaggccctcgtt
gccgattacgagcagcagtatcaggacggcctgatcacgcagcaggaaaagtacaacaag
gtaatcgacgcgtggagccgttgcggcgaccaggtggcggacgccatgatggacgaaatt
cgtgcgcggcccagggatgccgacggtcgtgaagcgcagatcaactcgatctacatgatg
agccactccggtgcgcgtggttcgccagcgcagatgaagcagctcgcgggtatgcgcggc
ctgatggccaagccttcgggcgaaatcatcgaacagccgatcatctcgaacttcaaggaa
ggtctgaccgttcttgaatacttcaactcgacccacggcgcgcgtaaaggcttggccgat
accgcgctgaagacggcgaactcaggctacctgacccgccgtctggtcgacgtgtcgcag
gactgcgtgatcgtcgaaaccgattgtaagacccagaacgcgctggaaatgcgggccatc
gttcagggtggttcggtgatcgcatcgctgggcgaacgtatccttggccgcaccgtggcg
gaagatatcgtcaacgccgcgaccggcgaagtgatcgccaaggccggcactctgctcgac
gaaccgatggtcaaggctatcgaagaggccgaagtgcaggtggcgaagatccgttcgccg
ctgatctgcgaagccgaacagggcgtttgcgcgacctgctacggtcgtgaccttgctcgc
ggtacgccggtgaacatcggtgaagcggttggcgtgatcgcggcgcagtcgatcggtgaa
ccgggcacgcagctgacgatgcgtaccttccacatcggcggtgcggcgcagctgaacgaa
accagccacctggaatcgatttcagacggtaagatcgaataccgcgacatgccgaccatc
atcgacaagcgtggcaagatcctgtcgatggcgcgtaacggtgaactggcggtggtcgac
gccgaagggcgtgaacgcgaaatccacaaggtgccgtatggtactgtcctgatgttcaag
gatggcgatgcggtgaaggaaggcgatcgcctggccgaatgggatccgttcaccctgccg
atcatcaccgaacagtcgggtacggtccgttatcaggatctgatcgacggtacgacgatg
gaagagcgcgtcgacgaaaccacgggcatcgcccagcgtgtcgtcaccgaactgcgcgca
tcgggtcgcaagaagaaggaagatctgcgtccgcggcttacgctgctgggcgaaggccag
accgacgacggcgaaaccgaagcgcaacgctacatgctcgcacctggcaccacgctgtcg
gtcgaagatgggcagcaggtcgaagcgggtgacattctcgcccgtgcatcgcgtgaagcc
gccaagacccgcgacatcaccggcggtctgccgcgtgtcgccgaattgttcgaagcgcgt
ataccgaaggacaatgcggttatcgccaagataagcggcaagatcgaattcgttcgtgaa
tacaaggccaagcgcaagatcgcgatcgtgccggaggaaggtgaagcagtcgagtacctg
atccccaagaccaaagtgatcgacgtgcaggaaggcgacttcgtgaagaagggcgatacg
ctcatctccggttcgcccaacccgcacgacattctggaagtcatgggtgttgaggcactg
gccgaatacctcgtgaacgaaatccaggaagtctatcgtttgcagggcgtgaagatcaac
gacaagcacatcgaggtgatcgttcgccagatgctgcagaaggttgaaatcaccgacggt
ggcgacaccgtgctgctgccgggcgaacaggtcgatctggaagaaatgaacgaagccaat
gccaagcttggcaagggcaagcagcctgccacgggcacgccgatcctgctggggatcacc
aaggcgagcctgcagacccgctcgttcatctccgccgcttcgttccaggaaaccacccgc
gtgctgacgcaggcggcggtcgaagggaagcgggactcgctgatcggtctgaaggaaaac
gtgattgttggccgcctgatcccggcgggcacaggcgcgggcatgaaccgcatgcgcgtg
accgcatccagtcgcgacgccgctctgcgcgcgcagtggaagaaggcgcaggaagcgatc
atcgctgccaactccgccgcagaagaacgcgccgccgaagcgctgcgcgatccgctcgac
gacactggcaacgatccgctggccgcggtcgaaggcgaaacccacggcaccgatgccgat
gcgggcgaatacctgcagaccgccgaagacactgccgccgaggacacggcgagcgaagac
aaggcagaggattga

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