Altererythrobacter sp. N1: LBX01_01350
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Entry
LBX01_01350 CDS
T10199
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
altn Altererythrobacter sp. N1
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LBX01_01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altn03019
]
LBX01_01350
03009 Ribosome biogenesis [BR:
altn03009
]
LBX01_01350
04131 Membrane trafficking [BR:
altn04131
]
LBX01_01350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
altn04147
]
LBX01_01350
Messenger RNA biogenesis [BR:
altn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LBX01_01350
Ribosome biogenesis [BR:
altn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LBX01_01350
Membrane trafficking [BR:
altn04131
]
SNARE
SNARE associated proteins
Others
LBX01_01350
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LBX01_01350
Exosome [BR:
altn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LBX01_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_22
CDC48_2
AAA_2
AAA_33
TIP49
AAA_14
IstB_IS21
AAA_7
RNA_helicase
AAA_28
AAA_lid_PRS2_C
nSTAND3
Mg_chelatase
NPHP3_N
AAA_18
Sigma54_activat
Vps4_C
ABC_tran
AAA_3
AAA_17
NACHT
Parvo_NS1
AAA_24
TsaE
AAA_11
DUF815
Zeta_toxin
AAA_30
NB-ARC
ATPase
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
UBS33305
LinkDB
All DBs
Position
complement(285131..287467)
Genome browser
AA seq
778 aa
AA seq
DB search
MAEDDAATIDRTVRLQVAAARQEESGQGIARMPRSAFQALGITEGDVVEVVGKRATAAIA
APAYPEDESLEVVRLDGLQRGNAETGSGEHVVIRSAESRPATRVVFAPAQREMRLQGPTQ
ALQRNFFRKPLVAGDIVATTGQQPVQNMPPEVRRMFNAPAYALTQIRLTVVSTSPKGIVH
IDENTEVELRPAFEEPRDARAVVNYDDVGGIGDTIQQLREMVELPLRYPELFTRLGVDPP
KGVLLHGPPGTGKTRLAQAVANESDADFFTINGPEIMGSGYGESEKHLREVFEGAAKAAP
AIIFIDEIDSIAPKRDRVAGEAEKRLVAQLLTLMDGLEARSNIVVIAATNRPDAIDEALR
RPGRFDREIVIGVPDEKGRREILAIHTRGMPLGDRVDLDELARTTHGFVGADIAALSREA
AIEAVRRIMPRLDLDERTVPPEVLEELQVTREDFLAALKRVQPSAMREVMVQMPNVGWSD
IGGLAKATEQLREGIELPLKNPEAFHRLGIRAAKGFLLYGPPGTGKTLLAKAVAKESEAN
FISMKSSDLLSKWYGESEQQIARMFQRARSVAPCVIFIDEIDSLVPARGTGQDEPAVTGR
VVNTILAEMDGLEELQSVIVIGATNRPTLVDPALLRPGRFDELVYVGTPDKDGRERILGI
HARNMPLASDVDLGVIAEKTERFTGADLEDIVRRAGLSALRRAGGEADSVTAADFTEALA
ESRATVTEEMENEYLKMRGELKKRAAAVRPTIGFITDGMLEPTREFKHGPDEGDPKGS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagacgacgcggcaacaatcgacaggacggtgaggttacaggttgcggcggcg
cggcaggaggaatcggggcagggaatcgcccggatgccccgctccgcgtttcaagctctg
ggaatcaccgagggcgatgtcgtcgaagtggtgggcaaacgggcgacggccgcaattgcc
gccccggcctatccggaagacgaatcgctcgaagtggtgcggctcgatgggttgcagcgt
ggcaatgcggaaaccggatccggcgaacatgtcgttattcgctctgccgaatcgcgcccg
gcgacgcgggtcgtgttcgcccctgctcagcgcgaaatgcgcctgcagggcccgacgcag
gccttgcagcgcaatttcttccgcaagccactggtggcgggcgatatcgttgccacgacc
ggtcagcagccggtgcagaatatgccgcccgaagtgcgccgtatgttcaacgcaccggct
tatgcccttacgcagatccgtctgactgtcgtatcgaccagccccaagggcatcgtccat
atcgacgagaataccgaagtcgaattgcgccccgctttcgaagagccgcgcgatgcccgt
gcggttgtgaactatgacgatgtcggcggcatcggcgatacgattcagcaattgcgcgaa
atggtcgaactgccgctacgctaccccgaattgttcacgcgcctcggggtcgatccgccc
aagggtgtgttgctccacggtccgccggggacgggcaagacccgtctggcacaagcggtc
gccaatgaaagcgatgcggacttcttcaccatcaacggcccggaaatcatgggttcgggc
tatggcgaaagcgagaagcatctgcgtgaagtgttcgagggagcggccaaagctgcgcct
gcgatcatcttcattgatgagatcgattcgatcgcccccaaacgcgacagggtcgctggc
gaggcggagaaacgactggttgcccagctccttacgctgatggatgggctggaggcgcgc
tccaacatcgtggtcatcgcagcgaccaaccgccccgatgcgatcgatgaagcattacgg
cggcccggtcggttcgaccgtgaaatcgtgatcggcgtaccagacgagaaagggcgccgc
gagattctggcgatccacacccgcggcatgccgctgggtgacagagttgatctggacgaa
ctggcgcgcacaacgcacgggttcgtcggcgccgatatcgcagccttgtcgcgcgaagcg
gcaatcgaggcagtgcggcgaatcatgccacggctcgatctcgacgaacgcaccgtgccg
ccagaagtgctggaagaactgcaagttacccgcgaggatttcctcgctgcgctcaagcgg
gtgcagccaagtgccatgcgcgaagtgatggtgcagatgcccaatgtgggctggagcgat
attggcgggctcgccaaagcgaccgaacagctccgcgaagggatcgagcttccgctcaag
aaccccgaggcatttcatcggctcggtattcgcgcggccaagggcttcctgctctacggg
cctccgggaacgggtaagacgctgctggcgaaggcagtggccaaggaatccgaagcgaac
ttcatttcgatgaagtcgagcgacctgctgtcgaaatggtacggcgagagcgaacaacag
atcgcccgcatgttccagcgggcccggtcggtcgcaccttgcgtcatcttcatcgacgaa
atcgacagtctcgttcccgcacgggggacggggcaagacgaaccggcggttaccggtcgt
gtcgtcaatacgatcctcgctgaaatggacgggctggaggaattgcagtcggtcatcgtg
atcggcgctaccaaccgtcccactctggtcgacccggcgttgctgcgaccggggcggttc
gatgaactggtttatgtcggaacgccggacaaagacgggcgcgaacgcattttgggtatc
catgcgcgcaatatgccgctggccagcgatgtcgatctgggcgtgattgctgagaaaaca
gagcgctttaccggtgctgatctggaagacatcgtgcgcagggcagggctcagtgccttg
cggcgtgcgggcggtgaggcggacagcgtcacggcggccgactttaccgaagctctggcg
gaatcgcgcgccacggtgacggaggagatggagaacgaatatctcaagatgcgcggcgaa
ctgaaaaagcgggctgctgctgttcgcccgacaatcggctttatcaccgacgggatgctg
gagccgacccgtgaattcaaacacgggcccgacgaaggcgatccgaagggcagctaa
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