KEGG   Altererythrobacter sp. N1: LBX01_01440
Entry
LBX01_01440       CDS       T10199                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
altn  Altererythrobacter sp. N1
Pathway
altn02020  Two-component system
altn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:altn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LBX01_01440 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LBX01_01440 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:altn03021]
    LBX01_01440 (rpoN)
Transcription machinery [BR:altn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LBX01_01440 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: UBS33322
LinkDB
Position
306694..308160
AA seq 488 aa
MALGPRLDLRQSQSLVMTPQLQQAIRLLALSNLELETFIGQALEANPLLDAGDIRADDAP
PQPLEEFPAEPGADSVAEGDAALDIDLSALDRDRDTGDSEWGGALSAGGPGEEGLSIDER
GAGEGPSLSDHLHAQIGAVAGDAREALIAATLIDLIDDAGYLTAPLSETADLLGVPLAEV
ERALALVQSLDPTGVGARTLAECLALQAKEADRYDPCMARLIDNLDLLARGEIARLRRMC
DVDEDDFSDMLAELRSYDPKPGLAFDGAGEAAIVPDILLSPAPRGDGWDIQLNEATLPRA
VVNRAYYVELRGGCTDKQSRAWLSEQLAEANWLIKALDQRARTILKVAAEIVKQQDGFFR
RGVSELRPLTLRTVADAIEMHESTVSRVTSNKYIACPRGTFELKYFFTSGVASADGEGAS
SEAVKAAIRELIDAEDPRKILSDDTLVTMLKDRGFDLARRTVAKYREAMGIGSSVQRRRA
KKLANLTR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgctggggccacggctcgacctgcggcagtcccagtcgctggtgatgacaccgcaa
ttgcagcaggcgatcaggctgctggcgctgtcgaacctcgaactcgaaacctttatcggg
caggcgctggaagccaatcccctgctggacgcaggcgatatccgcgccgacgatgctccg
ccgcaaccgctggaagaattccccgccgaaccgggcgccgacagcgtggccgaaggcgat
gccgcgctcgacatcgatctgtccgcgctcgaccgcgaccgcgataccggcgacagcgaa
tggggcggcgcgctgtcggcaggtggaccgggtgaagaaggcctgtcaatcgacgagcgg
ggtgcgggcgaagggccgagcctgtcggaccatctccacgcgcagatcggcgcggtcgcc
ggggacgcgcgagaggcgctgatcgcggccacgctgatcgatctgatcgacgatgcgggc
tatctcaccgccccgctcagcgaaaccgccgatctgctgggcgtgccactggccgaggtc
gaacgcgcactggcgctggtgcaatcgctcgatcccacgggcgtcggcgcgcgcacgctg
gctgaatgcctcgcgttgcaagcgaaagaggccgaccgctacgatccgtgcatggcgcgg
ctgatcgacaatctcgatctgctggcccggggagaaatcgcccggctgcggcggatgtgc
gatgtcgatgaagacgatttttccgatatgctggccgaactccgcagctacgatcccaag
cccggtctggcattcgatggcgcgggcgaagccgccatcgtgcccgatatcctgctgtcc
cccgcgcccaggggcgacgggtgggatattcagctcaacgaagccactctgccacgcgcg
gtggtcaatcgcgcctattatgtcgaactgcgcggcggctgcaccgacaagcaatcgcgc
gcatggctgagtgaacaactggcggaggccaactggctgataaaagcgctcgaccaacgc
gcgcgcacgatactgaaagtggccgccgaaatcgtgaagcagcaggacgggttcttccgc
cgcggcgtatccgaactgcgcccgctgactttgcggacagtggccgatgcgatcgaaatg
catgaaagcacggtcagccgggtcaccagcaacaaatatatcgcctgcccccgcgggacg
ttcgaactgaagtacttcttcaccagcggcgtggccagcgccgatggcgaaggggcatcg
tccgaagcggtcaaggctgcgatacgggaactgatcgatgccgaagatccgcgcaaaatc
ctgtcggacgatacattggtcactatgcttaaggatcgcgggttcgatctggcccggcgg
acagtggccaaataccgcgaagcgatgggcatcggttccagcgttcagcggcgccgcgca
aaaaagcttgccaacttaacaagatag

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