Altererythrobacter sp. N1: LBX01_01440
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Entry
LBX01_01440 CDS
T10199
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
altn Altererythrobacter sp. N1
Pathway
altn02020
Two-component system
altn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LBX01_01440 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LBX01_01440 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
altn03021
]
LBX01_01440 (rpoN)
Transcription machinery [BR:
altn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LBX01_01440 (rpoN)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UBS33322
LinkDB
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Position
306694..308160
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AA seq
488 aa
AA seq
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MALGPRLDLRQSQSLVMTPQLQQAIRLLALSNLELETFIGQALEANPLLDAGDIRADDAP
PQPLEEFPAEPGADSVAEGDAALDIDLSALDRDRDTGDSEWGGALSAGGPGEEGLSIDER
GAGEGPSLSDHLHAQIGAVAGDAREALIAATLIDLIDDAGYLTAPLSETADLLGVPLAEV
ERALALVQSLDPTGVGARTLAECLALQAKEADRYDPCMARLIDNLDLLARGEIARLRRMC
DVDEDDFSDMLAELRSYDPKPGLAFDGAGEAAIVPDILLSPAPRGDGWDIQLNEATLPRA
VVNRAYYVELRGGCTDKQSRAWLSEQLAEANWLIKALDQRARTILKVAAEIVKQQDGFFR
RGVSELRPLTLRTVADAIEMHESTVSRVTSNKYIACPRGTFELKYFFTSGVASADGEGAS
SEAVKAAIRELIDAEDPRKILSDDTLVTMLKDRGFDLARRTVAKYREAMGIGSSVQRRRA
KKLANLTR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggccacggctcgacctgcggcagtcccagtcgctggtgatgacaccgcaa
ttgcagcaggcgatcaggctgctggcgctgtcgaacctcgaactcgaaacctttatcggg
caggcgctggaagccaatcccctgctggacgcaggcgatatccgcgccgacgatgctccg
ccgcaaccgctggaagaattccccgccgaaccgggcgccgacagcgtggccgaaggcgat
gccgcgctcgacatcgatctgtccgcgctcgaccgcgaccgcgataccggcgacagcgaa
tggggcggcgcgctgtcggcaggtggaccgggtgaagaaggcctgtcaatcgacgagcgg
ggtgcgggcgaagggccgagcctgtcggaccatctccacgcgcagatcggcgcggtcgcc
ggggacgcgcgagaggcgctgatcgcggccacgctgatcgatctgatcgacgatgcgggc
tatctcaccgccccgctcagcgaaaccgccgatctgctgggcgtgccactggccgaggtc
gaacgcgcactggcgctggtgcaatcgctcgatcccacgggcgtcggcgcgcgcacgctg
gctgaatgcctcgcgttgcaagcgaaagaggccgaccgctacgatccgtgcatggcgcgg
ctgatcgacaatctcgatctgctggcccggggagaaatcgcccggctgcggcggatgtgc
gatgtcgatgaagacgatttttccgatatgctggccgaactccgcagctacgatcccaag
cccggtctggcattcgatggcgcgggcgaagccgccatcgtgcccgatatcctgctgtcc
cccgcgcccaggggcgacgggtgggatattcagctcaacgaagccactctgccacgcgcg
gtggtcaatcgcgcctattatgtcgaactgcgcggcggctgcaccgacaagcaatcgcgc
gcatggctgagtgaacaactggcggaggccaactggctgataaaagcgctcgaccaacgc
gcgcgcacgatactgaaagtggccgccgaaatcgtgaagcagcaggacgggttcttccgc
cgcggcgtatccgaactgcgcccgctgactttgcggacagtggccgatgcgatcgaaatg
catgaaagcacggtcagccgggtcaccagcaacaaatatatcgcctgcccccgcgggacg
ttcgaactgaagtacttcttcaccagcggcgtggccagcgccgatggcgaaggggcatcg
tccgaagcggtcaaggctgcgatacgggaactgatcgatgccgaagatccgcgcaaaatc
ctgtcggacgatacattggtcactatgcttaaggatcgcgggttcgatctggcccggcgg
acagtggccaaataccgcgaagcgatgggcatcggttccagcgttcagcggcgccgcgca
aaaaagcttgccaacttaacaagatag
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