Altererythrobacter sp. N1: LBX01_05335
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Entry
LBX01_05335 CDS
T10199
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
altn Altererythrobacter sp. N1
Pathway
altn03018
RNA degradation
Brite
Enzymes [BR:
altn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBX01_05335
Messenger RNA biogenesis [BR:
altn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBX01_05335
Ribosome biogenesis [BR:
altn03009
]
Prokaryotic type
rRNA helicases
LBX01_05335
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Gene cluster
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Other DBs
NCBI-ProteinID:
UBS34640
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Position
1119208..1121088
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AA seq
626 aa
AA seq
DB search
MPFSNLPPVLAEAIAARGYAAPTAVQAAVLAPDAAGRDLIVSAQTGSGKTVAFGLAFAAD
LLDSNGRLPPAESPLALVIAPTRELALQVSRELAWLYAGAGARIATCVGGMDASKERRNL
RGGAQIVVGTPGRLRDHLERGALDLSALRVAVLDEADEMLDMGFREDLEEILDGTPQERR
TLLFSATMPRQIVALATRYQNDALRISTVGDERGHGDIAYQAVTVSPAEIEAAVVNLLRF
HEAETAILFCATRDNVRRLHAMLQERGFAVVALSGEHSQSERNQALQALRDRRARVCVAT
DVAARGIDLPTLSLVIHVEIPRDAETLQHRSGRTGRAGKKGTAVIVVPFPRRRRVESMLR
GAKIEAEWIDAPTKAAIQEQDRERLLGALLQPVEIEEEDRALAQRLMAEKSPEDIAAALV
RAHRAAMPAPEDLTENTPEARKAAQQERHRPSFEDTVWFSMAIGRRHNADPRWILPLLCR
RGHITRNEIGAIRIGGNETHFQIPRAIASRFADAVERTAQGDDDQAAILIEPSEGPRETA
RDNRAGRREFGGKPARHGGKGPRRANDGERAYGKGPHKPGGKFAGKKPGKGPGGKGFGPK
VSGPNGGGSKTFGPKGGKPKGHAPKG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccaaccttccccccgtccttgcagaggcgattgctgcgcgtggctatgcc
gcgcccaccgctgtgcaggccgctgtccttgcccccgatgccgccgggcgtgacctgatc
gtttccgcacagaccggttcgggcaagaccgtggcgttcggcctcgccttcgctgccgac
ctgctcgattcgaatgggcgactgccccctgccgaatcgccgctggcgctggtgattgcg
ccgacgcgtgaactggcgttgcaggtcagccgcgaactggcatggctctatgccggtgct
ggtgcccggatcgcgacctgtgtgggcgggatggacgcatcaaaagaacgccgcaatctg
cgcggcggggcgcagatcgtggtcggcacgccgggccgcctgcgcgaccatctggagcgt
ggcgcgctcgatctgtcggcattgcgtgtcgctgtgctcgatgaagcggacgaaatgctc
gacatgggtttccgcgaagatctggaagaaatcctcgacggcactccgcaggaacggcgc
actttgctgttttccgccacgatgccgcgccagatcgtggcgctggcaacgcgctatcag
aacgatgcgctgcgtatttcgaccgtgggcgacgaacggggccacggcgatatcgcctat
caggcggtcaccgtctcacccgccgaaatcgaagcggcggtggtcaatctgctgcgtttt
cacgaggcggaaaccgcgatcctgttctgcgccacgcgcgacaatgtccgccgtctgcac
gccatgttgcaggaacgcggctttgctgtcgttgctttgtcgggcgaacattcgcagtcg
gaacgcaatcaggcgttgcaggcattgcgcgaccggcgcgcaagggtttgcgtggcgacc
gacgtggccgcgcgcgggatcgacctgccgacgctgagcctggtgatccatgtcgagatt
ccccgcgatgcggaaacgctgcaacaccgttcgggccgcaccgggcgtgcgggcaagaaa
gggactgcggttatcgtggttccgttcccccgtcgtcgccgggtggaatcgatgctgcgc
ggggcgaagatcgaagccgaatggatcgatgcgccgaccaaggctgcgattcaggaacag
gaccgcgagcgtttgctcggtgcgctgctccagccggttgagatcgaagaggaagaccgc
gcgctggcgcagcggctgatggcggaaaaatcgccggaagatatcgccgccgcactggtg
cgcgcccatcgcgcggcgatgcctgcgcccgaagatctgaccgagaatacccccgaagcg
cgcaaggccgcgcagcaggaacgccatcgccccagcttcgaagataccgtgtggttcagc
atggccatcgggcggcgacataatgccgatccacgctggattctgccgctgctgtgccgc
cgtgggcatatcacccgcaacgaaatcggcgcgatccgtatcggcgggaatgaaacccat
tttcagataccgcgcgcgattgccagccggtttgccgatgcggttgaacgcaccgcgcag
ggtgacgacgatcaggcggcaatcctgatcgaaccgtccgaaggcccgcgcgaaaccgcg
cgcgacaatcgcgcaggcaggcgcgagttcggcggaaaaccggcccgtcatggtggcaag
gggccacgccgcgccaacgatggcgagcgcgcctatggcaaagggccgcacaagcccggt
ggcaaattcgctggcaagaaacccggcaaagggccgggcgggaaaggttttgggccaaaa
gtttcagggccaaacggtggcggatcgaaaacgttcggtcccaaaggcggcaagccgaag
gggcacgcgccgaaaggctga
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