Altererythrobacter sp. N1: LBX01_05445
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Entry
LBX01_05445 CDS
T10199
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
altn Altererythrobacter sp. N1
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altn03032
]
LBX01_05445
03036 Chromosome and associated proteins [BR:
altn03036
]
LBX01_05445
03400 DNA repair and recombination proteins [BR:
altn03400
]
LBX01_05445
DNA replication proteins [BR:
altn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LBX01_05445
Chromosome and associated proteins [BR:
altn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LBX01_05445
DNA repair and recombination proteins [BR:
altn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LBX01_05445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
ClpB_D2-small
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UBS34063
LinkDB
All DBs
Position
1145924..1146205
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AA seq
93 aa
AA seq
DB search
MIRSELLQALAKDNPELRAEEVEQVVDIFFDEIAQRLAEGGRVELRGFGAFSTRERGARK
GRNPRTGDAVEVPAKKVPYFKPGKDMRQLINDA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatccgaactgcttcaggcattggccaaggataatccggagctgcgtgccgaa
gaggtagaacaggtcgtcgatatcttcttcgacgaaattgctcagcgactggccgaaggc
ggccgggtcgaactgcgcgggttcggcgcgttttcgacgcgtgaacggggcgcgcgcaag
ggccgcaatccccgcaccggcgacgcggtggaagttccggccaaaaaagtcccttatttc
aaacccggcaaggacatgcgtcagcttatcaacgacgcgtga
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