Altererythrobacter sp. N1: LBX01_08685
Help
Entry
LBX01_08685 CDS
T10199
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
altn Altererythrobacter sp. N1
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
altn03009
]
LBX01_08685 (rimO)
Enzymes [BR:
altn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LBX01_08685 (rimO)
Ribosome biogenesis [BR:
altn03009
]
Prokaryotic type
ribosomal protein modification factors
LBX01_08685 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UBS31593
LinkDB
All DBs
Position
complement(1848266..1849645)
Genome browser
AA seq
459 aa
AA seq
DB search
MSDSTSSIAIPDQKRVGMVSLGCPKALVDSERILTKLRADGYAMSPDYAGADVVLVNTCG
FLDSAKEESLAAIGEAIAENGRVIVTGCMGEEADTIRARFPQVLAVTGAHQYEQVVDAVH
EAAPPSQGPFVDLVPQPDIKLTPRHYSYLKISEGCNHSCAFCIIPQLRGKLASRRIDAVL
REAEKLVAAGTKELLVISQDTSAYGVDIRHEERQWHGHAVRAHMTDLARELGQLRTPDGH
TPWVRLHYVYPYPHVDAVIPLMGEGLLTPYLDIPFQHASPKVLKAMKRPANEAKVLERIK
SWRAIAPDLTIRSSFVVGFPGETEEDFTYLLDWLEEAQLDRVGAFRFEPVEGAAANDLPD
PVPEAVKEERYARLMEVTERISAAKLAAKVGRTLPVIVDEVGEPDEDGDIGATARSQADA
PEIDGQVFLRNVPATLAAGDIIDVTIEDADAHDLFGVPA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattccacttcatctattgcgatccccgatcagaaacgcgtcggcatggtcagc
ctgggttgccccaaggcgctggtcgattccgaacgtatcctcacaaagttgcgggccgat
ggctacgcgatgagcccggattacgccggggcggatgtcgtgctggtcaacacttgcggc
ttccttgacagcgcgaaggaagaaagcctcgccgctatcggtgaagcgatagcggaaaac
ggcagagtgatcgtaaccggttgcatgggcgaagaagcggacacgatccgcgcgcgtttc
ccgcaagtgctggcggtgaccggtgcccatcaatacgaacaggtggtcgatgccgtgcac
gaagcggccccgccatcgcaggggccattcgtcgatctggtcccgcaaccagatatcaaa
cttaccccgcgccattacagctatctgaaaatctccgaaggctgcaaccattcgtgcgcg
ttctgcatcatcccgcagttgcgcgggaaactggccagccgccggatcgacgcggtgctg
cgcgaagcggaaaagctggtcgcggcaggcacgaaagaactgctggtgatcagtcaggat
acctccgcctatggcgtcgatatccggcacgaggagcgccagtggcacggccacgcggtg
cgcgcccacatgaccgatctggcccgcgaactgggccagttgcggacgcccgacgggcac
acgccatgggtgcggctgcactatgtctatccctacccccatgtcgatgcggtgatcccg
ctgatgggtgaagggctgctgacgccgtatctcgacattccgttccagcacgccagcccc
aaagtgctgaaggcgatgaagcgccccgcgaacgaagccaaagtgctcgaacgcatcaaa
tcatggcgcgccatcgcgcccgatctgacgatccgttccagcttcgtggtcggcttcccc
ggcgagacggaggaggatttcacctacctgctcgactggctggaagaggcgcagcttgat
cgggtgggcgcattccggttcgaaccggtcgaaggggccgcagccaacgatctgcccgat
cccgtgcccgaagcggtgaaggaagaacgctatgcccggttgatggaagtgaccgagcgg
atcagcgccgccaaactggccgccaaagtgggccgcactctgccggtgatcgtcgatgaa
gtgggtgaacccgacgaagacggcgacatcggcgccaccgcccgcagccaggccgacgcg
cccgaaatcgacgggcaggtcttcctgcgcaatgtccccgctacgctggcggcaggcgac
atcatcgatgtaacaatcgaagacgccgacgcgcacgatctgttcggggtgcctgcctga
DBGET
integrated database retrieval system
