Altererythrobacter sp. N1: LBX01_10830
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Entry
LBX01_10830 CDS
T10199
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
altn Altererythrobacter sp. N1
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altn03400
]
LBX01_10830
Enzymes [BR:
altn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBX01_10830
DNA repair and recombination proteins [BR:
altn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LBX01_10830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UBS31993
LinkDB
All DBs
Position
2340175..2343117
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AA seq
980 aa
AA seq
DB search
MPERIHPQVYSIAAHRGFADALVAGLIPRYGDAELGLARLTLLLPSTRAIRTVHEAFVRA
SGGGMLMPRMAVVGDLDLDETLGVLLDPLGTADIPPAVDPTRRWLRLAEILRAEMGDDAP
RGSALLRLAKEFAATMDRLLVEDIGPQELLEERVMGVVGDLAEHWQRAVHRFARVQAIWL
AELAASGTIDAAARRNRLFDHAATHWRNNPPATPIVAAGVTSAAPALARLLRVVSELPQG
AVILPDLDLSMRQGVWDELGAAGASASPGDPPFSEGDAVTHPQYHLKLLLNRMGINRAEV
QQWHRKGVAAAPPERTHAISSLFLPPQASKIWVDLPAEKRRLSGVRVMETANPEEEAQAI
ALLIREAVSVPERRVALVTPDRPLARRVVQHLRRWNLEADDTAGRPLTLTASGRVLLQLA
DIAAQRAAPVSLIAALANPLVRYGEGRGEWLRHLRALEEELRGPRPAPGLTPVADIADEA
NVAEWWAEVSPILAPLCEDDSLPLAEWLNRLAAAGEALCGDALWSREDGRALAQFVEDLR
LHARDVGTVLEADELHAALSDAMEGNSVRPPYGGHPRVAIYGLIESRMARADLVICAGLN
EGTWPARPATDPLLAPAVLRALGVPGADFRIGLAAHDLAAALGAPDVVLSRARRDEGGPA
IASRFLLRVQALLGDLLDRHIETGAVELARALDDAPPAPPYPQPEPRPDTEQRKVALSVT
GLDRLRADPYQFYAGSILRLSEMDALDADPGPAWQGELAHKILEVWHKTHRPIADIAEEQ
LAQMHAHPLTRALWRPRLLKALEWVEGQIAADPARIPTLFEEWGSIEWNGVTIRGRIDRL
DRLEDGSYAVVDYKTGRPPSGAQVEAGYALQLGTLGLMVENGGFAKATGKATRFEYWSLG
RSDKSETGFGYVTTPIREGAKRSGIATDAFLPKAREYLDDALNRWILGDEPFTARLNPDA
PGYATYDQLMRLDEWMGREQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcgcatccacccgcaggtatattcgatcgccgcccatcgcggttttgccgat
gctctcgtggctgggctgatcccgcgttatggcgatgccgagctggggcttgcccggctg
actctgttgctcccgtccacccgcgcgatccgcactgtgcatgaagcgttcgtgcgggca
tcgggtggcgggatgctgatgccgcgcatggcggtggtgggcgatctcgacctggacgag
acgctgggcgttttgctcgacccgctgggcactgccgatattccgccggcggtcgatccc
acgcggcgatggctgcggctggcggaaatactccgcgccgaaatgggtgacgatgccccg
cgcggttcggccctgttgcgactggccaaagaattcgccgcgacgatggaccggctgctg
gtggaagacatcggcccgcaggaactgctggaagagcgggtgatgggcgtagtcggcgat
ctggccgaacactggcaacgggcggttcatcgctttgcgcgggtgcaggcgatctggctg
gcggaactggccgcctcaggcacgatcgacgcggctgcgcggcgcaaccgtctgttcgat
cacgcggcaactcattggcgcaataacccgcccgctacaccgattgtcgctgccggcgtg
accagcgccgcgcctgcgctggcgcgattgctgcgggtggtatcggaattgccgcagggg
gcggtgatcctgccggatctcgacttgtcgatgcggcagggtgtgtgggacgaactgggc
gcagcaggcgccagcgccagtcccggcgatccgccgttcagcgaaggcgacgcggtgacc
cacccgcaatatcatctcaagctgttgctcaaccggatgggcataaaccgggcggaagtg
cagcagtggcatcgcaagggcgtcgccgcggccccgccagagcgcacccatgcgatatcc
agcctgttcctgccgccgcaggcgagcaagatctgggtggacctgccagcggagaaacgc
cgcctttcgggtgtgcgggtaatggaaacggcgaaccctgaggaagaggcgcaggctatc
gccttgctgatccgcgaagcggtttcggtgcccgaacggcgggtggcgctggtcacaccg
gacagaccgctggcacggcgcgttgtccagcatctcaggcgctggaaccttgaagcggac
gataccgcagggcggccgctgacgttgaccgcatcgggcagagtgctccttcaactggcc
gatatcgcagctcagcgcgccgctccagtttcgctgattgcggctctggccaacccgctg
gtccgatatggcgaagggcgtggcgagtggctccgccatctgcgcgctctggaggaagag
ttgcggggcccgcgcccggcacccggtctgacacccgttgccgatattgccgatgaagcg
aacgttgccgagtggtgggcagaagtctccccgatcctcgcgccgctatgcgaggatgac
agcctgccgcttgccgaatggctgaaccgtctggccgctgcaggggaggcgctgtgcggg
gatgcattgtggagccgcgaggatgggcgcgcgctggcgcagtttgtggaagatctgcga
ctccacgcgcgcgatgtcggcactgtgctggaagcggacgagctacatgccgcgctcagc
gatgcgatggaaggcaattcagtgcgccctccctatggtggacatccgcgcgtggctatt
tacggtctgatcgaatcccgcatggcgcgcgccgatctggtcatttgtgccgggctgaac
gaaggcacctggcccgcacggcctgcaaccgatcctttgctggccccggcggtgttgcgg
gcgcttggcgtgccgggggcggattttcgcattgggctggcggcgcacgatctcgctgcg
gcgctgggtgcgcccgatgtcgtgctcagccgcgcccggcgtgacgaaggcggtccggcg
attgcctcacgcttccttctgcgtgtgcaggccttgctgggcgatttgcttgaccgccat
atcgaaacgggcgcggtcgaactagcacgcgctctggacgatgcgcccccggcaccgcca
tatccacagccggagccaaggcccgatacagagcagcgcaaggtcgcgcttagtgtcacc
gggctcgatcgtctgcgcgccgatccctaccaattctatgcgggttcgatccttcggttg
agcgagatggatgcgcttgatgccgatcccggcccggcgtggcagggggaactcgcgcac
aagatattggaagtgtggcacaagacccaccgcccaattgccgacatagcagaagagcag
ctggcgcaaatgcatgctcacccgctgacccgtgcgctgtggcgaccccgcttgctgaag
gctctggaatgggtcgaagggcaaatcgccgcggatccggcgcggatacccactctgttc
gaagagtggggcagcatcgaatggaacggagtgaccattcgtggccggatcgaccggctc
gatcgtctggaagacggcagctacgcagtcgtcgattacaagaccggtcgcccgcccagt
ggtgcgcaggtggaggcaggctatgctcttcagcttggcacactggggctgatggtggaa
aatggcggcttcgcgaaagccaccggcaaagccacccggttcgaatactggtcgctgggg
cgcagcgacaagagcgaaaccgggttcggatatgtgaccacgccgatccgggaaggggcc
aagcgcagcggaatcgccacagacgcgtttctgcccaaggcgcgcgaatatctcgacgac
gcgttgaaccgctggatattgggggacgagccattcaccgcgcggctcaatcccgatgcc
cccggatatgcgacgtatgaccagcttatgcggctcgatgaatggatggggcgcgaacaa
tga
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